MiMeDB: Showing metabocard for 2'-Deoxycytidine 3'-phosphate (MMDBc0057210)

Record Information

Version

1.0

Status

Detected and Quantified

Creation Date

2022-11-10 16:35:04 UTC

Update Date

2022-11-10 16:35:04 UTC

Metabolite ID

MMDBc0057210

Metabolite Identification

Common Name

2'-Deoxycytidine 3'-phosphate

Description

2'-Deoxycytidine-3'-monophosphate belongs to the class of organic compounds known as ribonucleoside 3'-phosphates. These are ribonucleosides that contain a phosphate group attached to the C-3 carbon of the ribose or deoxyribose moiety. The nucleobases here are limited to purine, pyrimidine, and pyridine derivatives. Based on a literature review a significant number of articles have been published on 2'-Deoxycytidine-3'-monophosphate.

Structure

MOL SDF PDB SMILES InChI

Synonyms

Value	Source
2'-Deoxycytidine-3'-monophosphoric acid	Generator

Molecular Formula

C₉H₁₄N₃O₇P

Average Mass

307.199

Monoisotopic Mass

307.056936801

IUPAC Name

Not Available

Traditional Name

Not Available

CAS Registry Number

Not Available

SMILES

Not Available

InChI Identifier

Not Available

InChI Key

FVSAHFFHPOLBLL-SHYZEUOFSA-N

Chemical Taxonomy

Description

Belongs to the class of organic compounds known as ribonucleoside 3'-phosphates. These are ribonucleosides that contain a phosphate group attached to the C-3 carbon of the ribose or deoxyribose moiety. The nucleobases here are limited to purine, pyrimidine, and pyridine derivatives.

Kingdom

Organic compounds

Super Class

Nucleosides, nucleotides, and analogues

Class

Ribonucleoside 3'-phosphates

Sub Class

Not Available

Direct Parent

Ribonucleoside 3'-phosphates

Alternative Parents

Substituents

Ribonucleoside 3'-phosphate
Aminopyrimidine
Pyrimidone
Monoalkyl phosphate
Hydropyrimidine
Organic phosphoric acid derivative
Phosphoric acid ester
Primary aromatic amine
Pyrimidine
Alkyl phosphate
Imidolactam
Oxolane
Heteroaromatic compound
Oxacycle
Azacycle
Organoheterocyclic compound
Amine
Hydrocarbon derivative
Primary amine
Primary alcohol
Organic oxide
Alcohol
Organooxygen compound
Organonitrogen compound
Organopnictogen compound
Organic oxygen compound
Organic nitrogen compound
Aromatic heteromonocyclic compound

Molecular Framework

Aromatic heteromonocyclic compounds

External Descriptors

Not Available

Functional Ontology

Not Available

Physical Properties

State

Not Available

Predicted Properties

Not Available

Spectra

Not Available

Biological Properties

Cellular Locations

Not Available

Biospecimen Locations

Not Available

Tissue Locations

Not Available

Associated OMIM IDs

114500 (Colorectal cancer)
610247 (Eosinophilic esophagitis)

Human Proteins and Enzymes

Protein ID	Protein Name	Protein Type	Uniprot ID	Species

Human Pathways

Pathways

Name	SMPDB/PathBank

Metabolic Reactions

Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0026008	2'-Deoxycytidine 3'-phosphate	Deoxycytidine	Polynucleotide kinase	Phosphorylation	RHEA	34755880

Health Effects and Bioactivity

Health Outcome/Bioactivity	Metabolite Response/Effect	Evidence Type	Host and Biospecimen	Data Source	Reference

Microbial Sources

Superkingdom/Kingdom	Phylum	Total species	Hosts and Body Sites	Microbial Links

Exposure Sources

Other Exposures

Source Type	Data Source	Reference

Host Biospecimen and Location

Host and Biospecimen	Status	Mean	Std	Min	Max	Units	Age	Sex	Health Condition	Data Source	Reference

External Links

HMDB ID

Not Available

DrugBank ID

Not Available

Phenol Explorer Compound ID

Not Available

FooDB ID

Not Available

KNApSAcK ID

Not Available

Chemspider ID

Not Available

KEGG Compound ID

Not Available

BioCyc ID

Not Available

BiGG ID

Not Available

Wikipedia Link

Not Available

METLIN ID

Not Available

PubChem Compound

12309192

PDB ID

Not Available

ChEBI ID

Not Available

Food Biomarker Ontology

Not Available

References

Synthesis Reference

Not Available

General References

Bansal P, Morgat A, Axelsen KB, Muthukrishnan V, Coudert E, Aimo L, Hyka-Nouspikel N, Gasteiger E, Kerhornou A, Neto TB, Pozzato M, Blatter MC, Ignatchenko A, Redaschi N, Bridge A: Rhea, the reaction knowledgebase in 2022. Nucleic Acids Res. 2022 Jan 7;50(D1):D693-D700. doi: 10.1093/nar/gkab1016. [PubMed:34755880 ]

Showing metabocard for 2'-Deoxycytidine 3'-phosphate (MMDBc0057210)

MOL for #<Metabolite:0x00005645ca2d9018>

3D MOL for #<Metabolite:0x00005645ca2d9018>

3D SDF for #<Metabolite:0x00005645ca2d9018>

3D-SDF for #<Metabolite:0x00005645ca2d9018>

PDB for #<Metabolite:0x00005645ca2d9018>

3D PDB for #<Metabolite:0x00005645ca2d9018>

SMILES for #<Metabolite:0x00005645ca2d9018>

INCHI for #<Metabolite:0x00005645ca2d9018>

Structure for #<Metabolite:0x00005645ca2d9018>

3D Structure for #<Metabolite:0x00005645ca2d9018>