| MMDBm0000026 | Bacillus cereus AH187 (F4810/72) | Eubacteria | Firmicutes | Human | Not Available | RHEA |
| MMDBm0000027 | Bacillus cytotoxicus NVH 391-98 | Eubacteria | Firmicutes | Human Feces | Not Available | RHEA |
| MMDBm0000028 | Bacillus halodurans C-125 | Eubacteria | Firmicutes | Human Feces | Not Available | RHEA |
| MMDBm0000132 | Clostridium perfringens ATCC 13124 | Eubacteria | Firmicutes | Human | Not Available | RHEA |
| MMDBm0000160 | Escherichia coli | Eubacteria | Proteobacteria | Human | Unknown | ECMDB |
| MMDBm0000162 | Escherichia coli CFT073 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0000334 | Pseudomonas putida | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0000411 | Rhodobacter capsulatus | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0000460 | Bacillus anthracis | Eubacteria | Firmicutes | Human | Not Available | RHEA |
| MMDBm0001170 | Acidiphilium cryptum JF-5 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001179 | Acidovorax sp. JS42 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001180 | Acidovorax ebreus TPSY | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001184 | Acinetobacter baumannii ATCC 17978 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001187 | Acinetobacter baumannii ACICU | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001200 | Agrobacterium tumefaciens str. C58 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001202 | Agrobacterium radiobacter K84 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001204 | Rhodoferax ferrireducens T118 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001209 | Vibrio fischeri ES114 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001210 | Vibrio fischeri MJ11 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001211 | Aliivibrio salmonicida LFI1238 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001220 | Anabaena variabilis ATCC 29413 | Eubacteria | Cyanobacteria | Not Available | Not Available | RHEA |
| MMDBm0001231 | Aquifex aeolicus VF5 | Eubacteria | Aquificae | Not Available | Not Available | RHEA |
| MMDBm0001248 | Bacillus subtilis subsp. subtilis str. 168 | Eubacteria | Firmicutes | Human Feces | Not Available | RHEA |
| MMDBm0001249 | Bacillus cereus ATCC 10987 | Eubacteria | Firmicutes | Human | Not Available | RHEA |
| MMDBm0001252 | Bacillus cereus ATCC 14579 | Eubacteria | Firmicutes | Human | Not Available | RHEA |
