| MMDBm0000026 | Bacillus cereus AH187 (F4810/72) | Eubacteria | Firmicutes | Human | Not Available | RHEA |
| MMDBm0000027 | Bacillus cytotoxicus NVH 391-98 | Eubacteria | Firmicutes | Human Feces | Not Available | RHEA |
| MMDBm0000028 | Bacillus halodurans C-125 | Eubacteria | Firmicutes | Human Feces | Not Available | RHEA |
| MMDBm0000185 | Fusobacterium nucleatum subsp. nucleatum ATCC 25586 | Eubacteria | Fusobacteria | Human | Not Available | RHEA |
| MMDBm0000221 | Ochrobactrum anthropi ATCC 49188 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0000334 | Pseudomonas putida | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0000336 | Pseudomonas syringae | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0000460 | Bacillus anthracis | Eubacteria | Firmicutes | Human | Not Available | RHEA |
| MMDBm0000527 | Streptomyces griseus | Eubacteria | Actinobacteria | Not Available | Not Available | RHEA |
| MMDBm0001069 | Lactobacillus acidophilus | Eubacteria | Firmicutes | Human | Indirect association between microbiota composition and metabolites measured in host biospecimen | Not Available |
| MMDBm0001170 | Acidiphilium cryptum JF-5 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001178 | Acidovorax citrulli AAC00-1 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001185 | Acinetobacter baumannii SDF | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001186 | Acinetobacter baumannii AYE | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001187 | Acinetobacter baumannii ACICU | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001188 | Acinetobacter baumannii AB0057 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001189 | Acinetobacter baumannii AB307-0294 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001200 | Agrobacterium tumefaciens str. C58 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001201 | Agrobacterium vitis S4 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001202 | Agrobacterium radiobacter K84 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001209 | Vibrio fischeri ES114 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001210 | Vibrio fischeri MJ11 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001211 | Aliivibrio salmonicida LFI1238 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001213 | Alkaliphilus metalliredigens QYMF | Eubacteria | Firmicutes | Not Available | Not Available | RHEA |
| MMDBm0001214 | Alkaliphilus oremlandii OhILAs | Eubacteria | Firmicutes | Not Available | Not Available | RHEA |
