| MMDBm0001191 | Actinobacillus pleuropneumoniae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001194 | Actinobacillus pleuropneumoniae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001193 | Actinobacillus pleuropneumoniae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001192 | Actinobacillus succinogenes | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001198 | Aeromonas hydrophila | Eubacteria | Proteobacteria | Facultative aerobe |
| MMDBm0001197 | Aeromonas salmonicida | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000015 | Akkermansia muciniphila | Eubacteria | Verrucomicrobia | Anaerobe |
| MMDBm0000023 | Arcobacter butzleri | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001212 | Alkalilimnicola ehrlichii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002004 | Alteromonas mediterranea | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0766854 | Aneurinibacillus thermoaerophilus | Eubacteria | Firmicutes | |
| MMDBm0001231 | Aquifex aeolicus | Eubacteria | Aquificae | Aerobe |
| MMDBm0001236 | Aromatoleum aromaticum | Eubacteria | Proteobacteria | Facultative |
| MMDBm0001244 | Azoarcus sp. BH72 | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0001247 | Azotobacter vinelandii | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001294 | avium | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001310 | Bradyrhizobium sp. BTAi1 | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001309 | Bradyrhizobium sp. ORS278 | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001326 | Buchnera aphidicola | Eubacteria | Proteobacteria | |
| MMDBm0001322 | Buchnera aphidicola | Eubacteria | Proteobacteria | |
| MMDBm0001323 | Buchnera aphidicola | Eubacteria | Proteobacteria | |
| MMDBm0001327 | Buchnera aphidicola | Eubacteria | Proteobacteria | |
| MMDBm0001329 | Burkholderia mallei | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001331 | Burkholderia pseudomallei | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001330 | Burkholderia pseudomallei | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001371 | Campylobacter concisus | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0001372 | Campylobacter jejuni | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0001373 | Campylobacter lari | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0001440 | Chlorobium chlorochromatii | Eubacteria | Chlorobi | Anaerobe |
| MMDBm0001443 | Chlorobium limicola | Eubacteria | Chlorobi | Anaerobe |
| MMDBm0001439 | Chlorobaculum parvum | Eubacteria | Chlorobi | Anaerobe |
| MMDBm0001441 | Chlorobium phaeobacteroides | Eubacteria | Chlorobi | Facultative anaerobe |
| MMDBm0001442 | Chlorobium phaeovibrioides | Eubacteria | Chlorobi | Facultative anaerobe |
| MMDBm0001438 | Chlorobium tepidum | Eubacteria | Chlorobi | Anaerobe |
| MMDBm0001449 | Chromohalobacter salexigens | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001647 | Geobacter bemidjiensis | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0000114 | acetobutylicum | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0001479 | psychrerythraea | Eubacteria | Proteobacteria | Facultatively anaerobe |
| MMDBm0001498 | burnetii | Eubacteria | Proteobacteria | Facultative |
| MMDBm0001499 | Coxiella burnetii | Eubacteria | Proteobacteria | Facultative |
| MMDBm0001496 | burnetii | Eubacteria | Proteobacteria | Facultative |
| MMDBm0001497 | burnetii | Eubacteria | Proteobacteria | Facultative |
| MMDBm0001495 | burnetii | Eubacteria | Proteobacteria | Facultative |
| MMDBm0001509 | Cyanothece sp. ATCC 51142 | Eubacteria | Cyanobacteria | Facultative |
| MMDBm0001501 | Cronobacter sakazakii | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001516 | Cytophaga hutchinsonii | Eubacteria | Bacteroidetes | Aerobe |
| MMDBm0001517 | Dechloromonas aromatica | Eubacteria | Proteobacteria | Facultative |
| MMDBm0001550 | Desulfovibrio desulfuricans | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001551 | Desulfovibrio magneticus | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001547 | Desulfovibrio vulgaris | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0002010 | Desulfovibrio vulgaris | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001588 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001594 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001598 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001600 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0542442 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001592 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001601 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001599 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001597 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001602 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001591 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001589 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001586 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000162 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001590 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0541555 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001595 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001593 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000167 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001565 | Edwardsiella ictaluri | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001571 | Enterobacter sp. 638 | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001576 | tasmaniensis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001596 | Escherichia fergusonii | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0000185 | Fusobacterium nucleatum | Eubacteria | Fusobacteria | Anaerobe |
| MMDBm0001648 | Geobacter sp. FRC-32 | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001646 | Geobacter lovleyi | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001644 | Geobacter metallireducens | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001968 | Geobacter sulfurreducens | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001649 | Geobacter sp. M21 | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001645 | Geobacter uraniireducens | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0001657 | Granulibacter bethesdensis | Eubacteria | Proteobacteria | |
| MMDBm0001969 | Haemophilus ducreyi | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001659 | Haemophilus influenzae | Eubacteria | Proteobacteria | Aerobe; facultative anaerobe |
| MMDBm0001660 | Haemophilus influenzae | Eubacteria | Proteobacteria | Aerobe; facultative anaerobe |
| MMDBm0001661 | Haemophilus influenzae | Eubacteria | Proteobacteria | Aerobe; facultative anaerobe |
| MMDBm0001658 | Haemophilus influenzae | Eubacteria | Proteobacteria | Aerobe; facultative anaerobe |
| MMDBm0001662 | Haemophilus parasuis | Eubacteria | Proteobacteria | Aerobe; facultative anaerobe |
| MMDBm0001680 | Halorhodospira halophila | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001383 | Candidatus Hamiltonella defensa | Eubacteria | Proteobacteria | |
| MMDBm0001979 | Helicobacter hepaticus | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001691 | Helicobacter pylori | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0001687 | Helicobacter pylori | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001686 | Helicobacter pylori | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001689 | Helicobacter pylori | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001685 | Helicobacter pylori | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001706 | Haemophilus somnus | Eubacteria | Proteobacteria | Aerobe; facultative anaerobe |
| MMDBm0001728 | Klebsiella pneumoniae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001727 | Klebsiella pneumoniae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001766 | Laribacter hongkongensis | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0002002 | Leptospira biflexa | Eubacteria | Spirochaetes | Aerobe |
| MMDBm0001777 | borgpetersenii | Eubacteria | Spirochaetes | Aerobe |
| MMDBm0001776 | borgpetersenii | Eubacteria | Spirochaetes | Aerobe |
| MMDBm0001999 | Leptospira biflexa | Eubacteria | Spirochaetes | Aerobe |
| MMDBm0001982 | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 | Eubacteria | Spirochaetes | Aerobe |
| MMDBm0001974 | Leptospira interrogans serovar Lai str. 56601 | Eubacteria | Spirochaetes | Aerobe |
| MMDBm0001796 | Magnetospirillum magneticum | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0001552 | Desulfovibrio salexigens | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001865 | Methylococcus capsulatus | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001818 | Methanocaldococcus jannaschii | Archaea | Euryarchaeota | Anaerobe |
| MMDBm0001854 | Methylibium petroleiphilum | Eubacteria | Proteobacteria | Facultative aerobe |
| MMDBm0001884 | Mycobacterium bovis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001891 | Mycobacterium bovis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001899 | Mycobacterium bovis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001894 | Mycobacterium tuberculosis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001882 | Mycobacterium tuberculosis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001880 | Mycobacterium tuberculosis | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001928 | Neisseria gonorrhoeae | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001933 | Neisseria gonorrhoeae | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001932 | Neisseria meningitidis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001930 | Neisseria meningitidis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001929 | Neisseria meningitidis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001931 | Neisseria meningitidis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001939 | Nitratiruptor sp. SB155-2 | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0002345 | Pasteurella multocida | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002346 | Pectobacterium atrosepticum | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0002347 | Pectobacterium carotovorum | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002355 | Pelodictyon phaeoclathratiforme | Eubacteria | Chlorobi | Anaerobe |
| MMDBm0002353 | Pelobacter carbinolicus | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0002361 | Photorhabdus luminescens | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002387 | Proteus mirabilis | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002389 | Pseudoalteromonas atlantica | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002404 | Pseudomonas aeruginosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002407 | Pseudomonas aeruginosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002399 | Pseudomonas aeruginosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002391 | Pseudomonas aeruginosa | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002398 | Pseudomonas entomophila | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002402 | Pseudomonas fluorescens | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002403 | Pseudomonas putida | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002397 | Pseudomonas fluorescens | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002405 | Pseudomonas putida | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002406 | Pseudomonas putida | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002396 | Pseudomonas syringae | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002418 | Psychromonas ingrahamii | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0002456 | Rhodospirillum rubrum | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002475 | Roseiflexus sp. RS-1 | Eubacteria | Chloroflexi | Aerobe; anaerobe |
| MMDBm0002498 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0548594 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002499 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0549171 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002500 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002496 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002495 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0550379 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002046 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0550377 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0550587 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0550758 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002492 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002506 | Serratia proteamaculans | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002515 | Shewanella amazonensis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002527 | Shewanella baltica | Eubacteria | Proteobacteria | Aerobe; anaerobe |
| MMDBm0002517 | Shewanella baltica | Eubacteria | Proteobacteria | Aerobe; anaerobe |
| MMDBm0002520 | Shewanella baltica | Eubacteria | Proteobacteria | Aerobe; anaerobe |
| MMDBm0002523 | Shewanella baltica | Eubacteria | Proteobacteria | Aerobe; anaerobe |
| MMDBm0002510 | Shewanella denitrificans | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002513 | Shewanella frigidimarina | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002524 | Shewanella halifaxensis | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002518 | Shewanella loihica | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002509 | Shewanella oneidensis | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002522 | Shewanella pealeana | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002519 | Shewanella putrefaciens | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002526 | Shewanella piezotolerans | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002514 | Shewanella sp. ANA-3 | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002521 | Shewanella sediminis | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002512 | Shewanella sp. MR-4 | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002511 | Shewanella sp. MR-7 | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002516 | Shewanella sp. W3-18-1 | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002525 | Shewanella woodyi | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002535 | Shigella boydii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002533 | Shigella boydii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002532 | Shigella dysenteriae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000368 | Shigella flexneri | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002531 | Shigella sonnei | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001987 | Sodalis glossinidius | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0002635 | Streptomyces coelicolor | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0002654 | Sulfurimonas denitrificans | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0002352 | Pelobacter carbinolicus | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0882069 | Synechocystis sp. PCC 6803 | Eubacteria | | |
| MMDBm0002701 | Thermoplasma acidophilum | Archaea | Euryarchaeota | Facultative anaerobe |
| MMDBm0002702 | Thermoplasma volcanium | Archaea | Euryarchaeota | Facultative anaerobe |
| MMDBm0002006 | Thermodesulfovibrio yellowstonii | Eubacteria | Nitrospirae | |
| MMDBm0002719 | Thiobacillus denitrificans | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002722 | Tolumonas auensis | Eubacteria | Proteobacteria | Facultative |
| MMDBm0002739 | Vibrio cholerae | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002741 | Vibrio parahaemolyticus | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002740 | Vibrio vulnificus | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002759 | Wolinella succinogenes | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0002781 | Yersinia enterocolitica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002783 | pseudotuberculosis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002780 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0562461 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002784 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002779 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002782 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002785 | pseudotuberculosis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001367 | Campylobacter jejuni | Eubacteria | Proteobacteria | Microaerophilic |
| MMDBm0001367 | Campylobacter jejuni | Eubacteria | Proteobacteria | Microaerophilic |