| MMDBm0001200 | Agrobacterium tumefaciens | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0000028 | Bacillus halodurans | Eubacteria | Firmicutes | Facultative aerobe |
| MMDBm0000046 | Bacteroides fragilis | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0000047 | Bacteroides fragilis | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0001255 | Bacillus licheniformis | Eubacteria | Firmicutes | Facultative aerobe |
| MMDBm0001260 | Bacillus pumilus | Eubacteria | Firmicutes | Aerobe |
| MMDBm0001257 | Bacillus clausii | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001248 | Bacillus subtilis | Eubacteria | Firmicutes | Facultative aerobe |
| MMDBm0001349 | Burkholderia cenocepacia | Eubacteria | Proteobacteria | Facultative aerobe |
| MMDBm0001359 | Caldicellulosiruptor bescii | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0001409 | Caulobacter crescentus | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0001411 | Caulobacter crescentus | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002439 | Rhodobacter sphaeroides | Eubacteria | Proteobacteria | Aerobe; anaerobe |
| MMDBm0002441 | Rhodobacter sphaeroides | Eubacteria | Proteobacteria | Aerobe; anaerobe |
| MMDBm0001501 | Cronobacter sakazakii | Eubacteria | Proteobacteria | Anaerobe |
| MMDBm0001562 | Dickeya dadantii | Eubacteria | Proteobacteria | Facultative |
| MMDBm0001588 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001594 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001598 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001600 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0542442 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001592 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001601 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001599 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001597 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001602 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001591 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001589 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001586 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000162 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001590 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0541555 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001595 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001593 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000167 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000169 | Escherichia coli | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001565 | Edwardsiella ictaluri | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001571 | Enterobacter sp. 638 | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0001725 | Kineococcus radiotolerans | Eubacteria | Actinobacteria | Aerobe |
| MMDBm0001748 | Lactobacillus casei | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0000171 | Eubacterium eligens ATCC 27750 | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0001741 | Lactobacillus casei | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0000198 | Lachnoclostridium phytofermentans | Eubacteria | Firmicutes | Anaerobe |
| MMDBm0001740 | brevis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0001973 | Oceanobacillus iheyensis | Eubacteria | Firmicutes | Aerobe |
| MMDBm0001998 | Opitutus terrae | Eubacteria | Verrucomicrobia | Anaerobe |
| MMDBm0001348 | Burkholderia phytofirmans | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0559414 | Pectobacterium carotovorum | Eubacteria | Proteobacteria | |
| MMDBm0002359 | Phenylobacterium zucineum | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002440 | Rhodobacter sphaeroides | Eubacteria | Proteobacteria | Aerobe; anaerobe |
| MMDBm0002442 | Rhodobacter sphaeroides | Eubacteria | Proteobacteria | Aerobe; anaerobe |
| MMDBm0002498 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0548594 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002499 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0549171 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002500 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002496 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002495 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0550379 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002046 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0550426 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0550377 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0550587 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0550758 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002492 | Salmonella enterica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002535 | Shigella boydii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002533 | Shigella boydii | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002534 | Shigella flexneri | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000368 | Shigella flexneri | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002531 | Shigella sonnei | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002722 | Tolumonas auensis | Eubacteria | Proteobacteria | Facultative |
| MMDBm0001972 | Xanthomonas citri | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002764 | Xanthomonas campestris | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002763 | Xanthomonas campestris | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002766 | Xanthomonas campestris | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002761 | Xanthomonas campestris | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0002781 | Yersinia enterocolitica | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002783 | pseudotuberculosis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002780 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002786 | pseudotuberculosis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0562461 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002784 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002779 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002782 | Yersinia pestis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002778 | pseudotuberculosis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0002785 | pseudotuberculosis | Eubacteria | Proteobacteria | Facultative anaerobe |
| MMDBm0000055 | thetaiotaomicron | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0001575 | Enterococcus faecalis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002538 | Sinorhizobium meliloti | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0000055 | thetaiotaomicron | Eubacteria | Bacteroidetes | Anaerobe |
| MMDBm0001575 | Enterococcus faecalis | Eubacteria | Firmicutes | Facultative anaerobe |
| MMDBm0002538 | Sinorhizobium meliloti | Eubacteria | Proteobacteria | Aerobe |
| MMDBm0404762 | Formosa agariphila | Eubacteria | Bacteroidetes | |