MiMeDB: Salmonella enterica (MMDBm0000620)

Microbe Identification

Microbe name

Salmonella enterica

NCBI Taxonomy ID

28901

Microbe Taxonomy

Superkingdom

Bacteria

Kingdom

Eubacteria

Phylum

Proteobacteria

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Salmonella

Species

enterica

Subspecies

arizonae; enterica; houtenae

Microbe Properties

Gram staining properties

Positive

Shape

Bacilli

Mobility

Flagellar presence

Not Available

Number of membranes

Not Available

Oxygen preference

Facultative anaerobe

Optimal temperature

Temperature range

Mesophilic

Habitat

Multiple

Biotic relationship

Free living

Cell arrangement

Pairs - Singles

Sporulation

Pairs - Singles

Metabolism

Not Available

Energy source

Chemoorganotroph

Host and Biospecimens

Host	Body site	Biospecimen	Details	Data Source	Reference
Human	Gastrointestinal tract		Not Available	BacDive	34718743
Human	Large intestine		Not Available	BacDive	34718743
Human	Rectum		Not Available	BacDive	34718743
Human	Large intestine	Feces	Not Available	Disbiome	22529960

Health Effects

Host	Related Health Condition	Biospecimen	Microbal response/effect	Data Source	Reference
Human	Diarrhea			BacDive
Human	Crohn's disease		Elevated	Disbiome	22529960

Related Metabolites

Metabolic Reactions

Reactions

This table shows at most 10 reactions. For the full list of associated reactions:

See All Associated Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0024345	L-Tyrosine	Hydrogen Ion	Tyrosine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024346	NAD	Hydrogen Ion	Enoyl-[acyl-carrier-protein] reductase [NADH]	Reduction; Synthesis	RHEA	34755880
MMDBr0024355	L-Tyrosine	Hydrogen Ion	Tyrosine-protein kinase ptk	Phosphorylation	RHEA	34755880
MMDBr0024360	L-Valine	diphosphate	Valine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024368	L-Isoleucine	diphosphate	Isoleucine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024371	L-Asparagine	Hydrogen Ion	Asparagine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024375	Adenosine triphosphate	diphosphate	Poly(A) polymerase I	Nucleic acid synthesis and/or repair	RHEA	34755880
MMDBr0024386	Selenocysteine	hydrogenselenide	Cysteine desulfurase	Desulfuration	RHEA	34755880
MMDBr0024389	L-Leucine	diphosphate	Leucine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024392	L-Cystine	L-Cysteine	Phosphoadenosine 5'-phosphosulfate reductase	Reduction	RHEA	34755880

Genome Data

Genome Link

MMDBm0000620

Genome Length

4926843 bp

# Predicted Proteins

4654

GenBank Sequence Modification Date

17-FEB-2022

MiMeDB Deposition Date

2022-08-28 03:48:37 UTC

Reference

PMID: 17704766

Source Links

GenBank

NC_003197

MiMeDB ID	Organism	Strain	Serotype	Variant	NCBI Taxonomy	BaSyS2 Genome
MMDBm0002046	Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7	SPB7	Paratyphi	-	1016998	View
MMDBm0002091	Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74	ST4/74	Typhimurium	-	909946	View
MMDBm0002149	Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S	14028S	Typhimurium	-	588858	View
MMDBm0002198	Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344	SL1344	Typhimurium	-	216597	View
MMDBm0002274	Salmonella enterica subsp. enterica serovar Typhimurium str. D23580	D23580	Typhimurium	-	568708	View
MMDBm0002492	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2	LT2	Typhimurium	-	99287	View
MMDBm0002493	Salmonella enterica subsp. enterica serovar Typhi str. CT18	CT18	Typhi	-	220341	View
MMDBm0002494	Salmonella enterica subsp. enterica serovar Typhi str. Ty2	Ty2	Typhi	-	209261	View
MMDBm0002495	Salmonella enterica subsp. enterica serovar Newport str. SL254	SL254	Newport	-	423368	View
MMDBm0002496	Salmonella enterica subsp. enterica serovar Heidelberg str. SL476	SL476	Heidelberg	-	454169	View
MMDBm0002497	Salmonella enterica subsp. enterica serovar Paratyphi A str.	-	Paratyphi	-	54388	View
MMDBm0002498	Salmonella enterica subsp. enterica serovar Agona str. SL483	SL483	Agona	-	454166	View
MMDBm0002499	Salmonella enterica subsp. enterica serovar Dublin str. CT02021853	CT02021853	Dublin	-	439851	View
MMDBm0002500	Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91	287/91	Gallinarum	-	550538	View
MMDBm0547793	Salmonella enterica subsp. arizonae serovar 62:z4,z23:-	-	62:z4,z23:-	-	41514	View
MMDBm0548150	Salmonella enterica subsp. enterica serovar Anatum	-	Anatum	-	58712	View
MMDBm0548237	Salmonella enterica subsp. enterica serovar Austin	-	Austin	-	47066	View
MMDBm0548413	Salmonella enterica subsp. enterica serovar Borreze	-	Borreze	-	55400	View
MMDBm0548594	Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67	SC-B67	Choleraesuis	-	321314	View
MMDBm0548653	Salmonella enterica subsp. enterica serovar Dublin	-	Dublin	-	98360	View
MMDBm0548691	Salmonella enterica subsp. enterica serovar Enteritidis	-	Enteritidis	-	149539	View
MMDBm0548815	Salmonella enterica subsp. enterica serovar Enteritidis str. 2009K0958	2009K0958	Enteritidis	-	1192586	View
MMDBm0549171	Salmonella enterica subsp. enterica serovar Enteritidis str. P125109	P125109	Enteritidis	-	550537	View
MMDBm0549297	Salmonella enterica subsp. enterica serovar Gallinarum	-	Gallinarum	-	594	View
MMDBm0549623	Salmonella enterica subsp. enterica serovar Infantis	-	Infantis	-	595	View
MMDBm0549910	Salmonella enterica subsp. enterica serovar Montevideo	-	Montevideo	-	115981	View
MMDBm0550057	Salmonella enterica subsp. enterica serovar Muenchen	-	Muenchen	-	596	View
MMDBm0550377	Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601	AKU	Paratyphi	-	554290	View
MMDBm0550379	Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150	ATCC 9150	Paratyphi	-	295319	View
MMDBm0550426	Salmonella enterica subsp. enterica serovar Paratyphi C str. RKS4594	RKS4594	Paratyphi	-	476213	View
MMDBm0550449	Salmonella enterica subsp. enterica serovar Potsdam	-	Potsdam	-	597	View
MMDBm0550452	Salmonella enterica subsp. enterica serovar Pullorum	-	Pullorum	-	605	View
MMDBm0550587	Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633	CVM19633	Schwarzengrund	-	439843	View
MMDBm0550734	Salmonella enterica subsp. enterica serovar Thompson	-	Thompson	-	600	View
MMDBm0550758	Salmonella enterica subsp. enterica serovar Typhi	-	Typhi	-	90370	View
MMDBm0550781	Salmonella enterica subsp. enterica serovar Typhimurium	-	Typhimurium	-	90371	View
MMDBm0550879	Salmonella enterica subsp. enterica serovar Typhimurium str. LT2-4	LT2-4	Typhimurium	-	1159899	View
MMDBm0550981	Salmonella enterica subsp. enterica serovar Virchow	-	Virchow	-	48409	View
MMDBm0550983	Salmonella enterica subsp. enterica serovar Virchow str. SL491	SL491	Virchow	-	465517	View
MMDBm0550984	Salmonella enterica subsp. enterica serovar Virchow str. SVQ1	SVQ1	Virchow	-	1249525	View
MMDBm0551057	Salmonella enterica subsp. houtenae	-	-	-	59205	View