MiMeDB: Pyrobaculum calidifontis (MMDBm0000872)

Microbe Identification

Microbe name

Pyrobaculum calidifontis

NCBI Taxonomy ID

181486

Microbe Taxonomy

Superkingdom

Archaea

Kingdom

Not Available

Phylum

Crenarchaeota

Class

Thermoprotei

Order

Thermoproteales

Family

Thermoproteaceae

Genus

Pyrobaculum

Species

calidifontis

Microbe Properties

Gram staining properties

Positive

Shape

Bacilli

Mobility

Flagellar presence

Number of membranes

Oxygen preference

Facultative anaerobe

Optimal temperature

Temperature range

Hyperthermophilic

Habitat

Specialized

Biotic relationship

Free living

Cell arrangement

Not Available

Sporulation

Nonsporulating

Metabolism

Not Available

Energy source

Heterotroph

Host and Biospecimens

Host	Body site	Biospecimen	Details	Data Source	Reference
Human	Gut	Feces	Expected but not quantified	Manually Annotated	Not Available

Health Effects

Host	Related Health Condition	Biospecimen	Microbal response/effect	Data Source	Reference

Related Metabolites

Metabolic Reactions

Reactions

This table shows at most 10 reactions. For the full list of associated reactions:

See All Associated Reactions

Reaction ID	Precursor	Product	Enzyme	Reaction Type	Data Source	Reference
MMDBr0024345	L-Tyrosine	Hydrogen Ion	Tyrosine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024389	L-Leucine	diphosphate	Leucine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024411	L-Serine	Hydrogen Ion	Type-2 serine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024415	(S)-4-Amino-5-oxopentanoate	Hydrogen Ion	Glutamyl-tRNA reductase	Reduction	RHEA	34755880
MMDBr0024418	L-Alanine	diphosphate	Alanine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024424	S-Adenosylmethionine	S-Adenosylhomocysteine	Protein-L-isoaspartate O-methyltransferase	Methylation	RHEA	34755880
MMDBr0024449	L-Methionine	diphosphate	Methionine--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024474	L-Proline	diphosphate	Proline--tRNA ligase	Ligation	RHEA	34755880
MMDBr0024539	Tetra-mu3-sulfido-tetrairon(2+)	5'-Deoxyadenosine	Lipoyl synthase	Synthesis	RHEA	34755880
MMDBr0024559	Adenosine triphosphate	Hydrogen Ion	Histidine--tRNA ligase	Ligation	RHEA	34755880

Genome Data

Genome Link

MMDBm0000872

Genome Length

2038018 bp

# Predicted Proteins

2308

GenBank Sequence Modification Date

17-FEB-2022

MiMeDB Deposition Date

2022-08-29 16:21:56 UTC

Reference

PMID: 17704766

Source Links

GenBank

NC_009073