| MMDBm0000114 | Clostridium acetobutylicum ATCC 824 | Eubacteria | Firmicutes | Human Feces | Not Available | RHEA |
| MMDBm0000368 | Shigella flexneri | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0000423 | Staphylococcus aureus | Eubacteria | Firmicutes | Human | Not Available | RHEA |
| MMDBm0001248 | Bacillus subtilis subsp. subtilis str. 168 | Eubacteria | Firmicutes | Human Feces | Not Available | RHEA |
| MMDBm0001273 | Bacillus subtilis subsp. spizizenii str. W23 | Eubacteria | Firmicutes | Not Available | Not Available | RHEA |
| MMDBm0001818 | Methanocaldococcus jannaschii DSM 2661 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001825 | Methanococcus maripaludis S2 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001826 | Methanococcus maripaludis C5 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001827 | Methanococcus vannielii SB | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001828 | Methanococcus aeolicus Nankai-3 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001829 | Methanococcus maripaludis C7 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001930 | Neisseria meningitidis Z2491 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001963 | Thermotoga maritima MSB8 | Eubacteria | Thermotogae | Not Available | Not Available | RHEA |
| MMDBm0002424 | Pyrococcus horikoshii OT3 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0002429 | Ralstonia solanacearum GMI1000 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0002492 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0002555 | Staphylococcus aureus subsp. aureus N315 | Eubacteria | Firmicutes | Human | Not Available | RHEA |
| MMDBm0002556 | Staphylococcus aureus subsp. aureus Mu50 | Eubacteria | Firmicutes | Human | Not Available | RHEA |
| MMDBm0002557 | Staphylococcus aureus subsp. aureus COL | Eubacteria | Firmicutes | Human | Not Available | RHEA |
| MMDBm0002558 | Staphylococcus aureus subsp. aureus MRSA252 | Eubacteria | Firmicutes | Human | Not Available | RHEA |
| MMDBm0002559 | Staphylococcus aureus subsp. aureus MSSA476 | Eubacteria | Firmicutes | Human | Not Available | RHEA |
| MMDBm0002561 | Staphylococcus aureus subsp. aureus MW2 | Eubacteria | Firmicutes | Human | Not Available | RHEA |
| MMDBm0002567 | Staphylococcus aureus subsp. aureus NCTC 8325 | Eubacteria | Firmicutes | Human | Not Available | RHEA |
| MMDBm0492308 | Ralstonia solanacearum | Bacteria | Proteobacteria | Human Mucosa | Not Available | RHEA |
| MMDBm0541555 | Escherichia coli K-12 | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
