| MMDBm0000015 | Akkermansia muciniphila ATCC BAA-835 | Eubacteria | Verrucomicrobia | Human | Not Available | RHEA |
| MMDBm0000023 | Arcobacter butzleri RM4018 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0000114 | Clostridium acetobutylicum ATCC 824 | Eubacteria | Firmicutes | Human Feces | Not Available | RHEA |
| MMDBm0000162 | Escherichia coli CFT073 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0000167 | Escherichia coli SMS-3-5 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0000185 | Fusobacterium nucleatum subsp. nucleatum ATCC 25586 | Eubacteria | Fusobacteria | Human | Not Available | RHEA |
| MMDBm0000368 | Shigella flexneri | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001191 | Actinobacillus pleuropneumoniae serovar 5b str. L20 | Eubacteria | Proteobacteria | Pig | Not Available | RHEA |
| MMDBm0001192 | Actinobacillus succinogenes 130Z | Eubacteria | Proteobacteria | Cattle | Not Available | RHEA |
| MMDBm0001193 | Actinobacillus pleuropneumoniae serovar 3 str. JL03 | Eubacteria | Proteobacteria | Pig | Not Available | RHEA |
| MMDBm0001194 | Actinobacillus pleuropneumoniae serovar 7 str. AP76 | Eubacteria | Proteobacteria | Pig | Not Available | RHEA |
| MMDBm0001197 | Aeromonas salmonicida subsp. salmonicida A449 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001198 | Aeromonas hydrophila subsp. hydrophila ATCC 7966 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001212 | Alkalilimnicola ehrlichii MLHE-1 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001231 | Aquifex aeolicus VF5 | Eubacteria | Aquificae | Not Available | Not Available | RHEA |
| MMDBm0001236 | Aromatoleum aromaticum EbN1 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001244 | Azoarcus sp. BH72 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001247 | Azotobacter vinelandii DJ | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001294 | Bordetella avium 197N | Eubacteria | Proteobacteria | Turkey | Not Available | RHEA |
| MMDBm0001309 | Bradyrhizobium sp. ORS278 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001310 | Bradyrhizobium sp. BTAi1 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001322 | Buchnera aphidicola str. APS (Acyrthosiphon pisum) | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001323 | Buchnera aphidicola str. Sg (Schizaphis graminum) | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001326 | Buchnera aphidicola str. 5A (Acyrthosiphon pisum) | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001327 | Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum) | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
