| MMDBm0000028 | Bacillus halodurans C-125 | Eubacteria | Firmicutes | Human Feces | Not Available | RHEA |
| MMDBm0000114 | Clostridium acetobutylicum ATCC 824 | Eubacteria | Firmicutes | Human Feces | Not Available | RHEA |
| MMDBm0000185 | Fusobacterium nucleatum subsp. nucleatum ATCC 25586 | Eubacteria | Fusobacteria | Human | Not Available | RHEA |
| MMDBm0000218 | Methanobrevibacter smithii ATCC 35061 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0000463 | Bacillus megaterium | Eubacteria | Firmicutes | Human Saliva | Not Available | RHEA |
| MMDBm0001358 | Thermoanaerobacter tengcongensis MB4 | Eubacteria | Firmicutes | Not Available | Not Available | RHEA |
| MMDBm0001455 | Clostridium tetani E88 | Eubacteria | Firmicutes | Human | Not Available | RHEA |
| MMDBm0001518 | Dehalococcoides ethenogenes 195 | Eubacteria | Chloroflexi | Not Available | Not Available | RHEA |
| MMDBm0001519 | Dehalococcoides sp. CBDB1 | Eubacteria | Chloroflexi | Not Available | Not Available | RHEA |
| MMDBm0001652 | Gloeobacter violaceus PCC 7421 | Eubacteria | Cyanobacteria | Not Available | Not Available | RHEA |
| MMDBm0001669 | Haloarcula marismortui ATCC 43049 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001671 | Halobacterium sp. NRC-1 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001701 | Herminiimonas arsenicoxydans | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001744 | Lactobacillus reuteri DSM 20016 | Eubacteria | Firmicutes | Human | Not Available | RHEA |
| MMDBm0001746 | Lactobacillus reuteri JCM 1112 | Eubacteria | Firmicutes | Human | Not Available | RHEA |
| MMDBm0001784 | Listeria monocytogenes serotype 4b str. F2365 | Eubacteria | Firmicutes | Human | Not Available | RHEA |
| MMDBm0001785 | Listeria monocytogenes EGD-e | Eubacteria | Firmicutes | Not Available | Not Available | RHEA |
| MMDBm0001786 | Listeria innocua Clip11262 | Eubacteria | Firmicutes | Not Available | Not Available | RHEA |
| MMDBm0001818 | Methanocaldococcus jannaschii DSM 2661 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001826 | Methanococcus maripaludis C5 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001827 | Methanococcus vannielii SB | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001829 | Methanococcus maripaludis C7 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001843 | Methanosarcina acetivorans C2A | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001845 | Methanosarcina barkeri str. Fusaro | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
| MMDBm0001846 | Methanosphaera stadtmanae DSM 3091 | Archaea | Euryarchaeota | Not Available | Not Available | RHEA |
