Showing metabocard for all-trans-heptaprenyl diphosphate (MMDBc0054332)
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Version | 1.0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Status | Detected and Quantified | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Creation Date | 2022-06-05 23:07:18 UTC | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Update Date | 2024-04-30 20:52:36 UTC | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Metabolite ID | MMDBc0054332 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Metabolite Identification | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Common Name | all-trans-heptaprenyl diphosphate | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Description | all-trans-Heptaprenyl diphosphate is the final product of the heptaprenyl diphosphate biosynthesis pathway. In this pathway, multiple units of isopentenyl diphosphate (IPP) undergo a series of polymerizations to form a polyisoprenoid chain. The sequential addition of isoprenyl units to all-trans-farnesyl diphosphate is performed by polyprenyl diphosphate synthase enzymes such as the E. coli enzyme octaprenyl diphosphate synthase. Additional isoprenoid units are added to a maximal length that is determined by the specific enzyme. Most organisms generate polyprenyl chains of predominantly one length. Once completed, the polyprenyl chain is incorporated into other molecules, such as quinones. The enzyme that attaches the polyprenyl chain to the quinone precursor molecule does not have a preference for any particular length. Thus, the length of the polyprenyl chain in the mature quinone molecule is determined by the predominant polyprenyl diphosphate synthase enzyme of the organism. In most organisms, there is one type of predominant quinone, with a specific polyprenyl chain length. However, most organisms also have minor amounts of quinones with a different polyprenyl chain length. Organisms whose main quinone contains a chain of 7 isoprenyl units include some Gram-negative bacteria (e.g. the gliding bacterium Flexibacter elegans and the phototroph Allochromatium vinosum strain D), but mostly Gram-positive bacteria, such as many members of the Bacillus, Staphylococcus, and Listeria genera. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Structure | MOL for #<Metabolite:0x00007f923b7452c8>Mrv1652306222023372D 50 49 0 0 0 0 999 V2000 -15.2625 -9.2881 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -15.2625 -7.8592 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -12.7875 -6.4302 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -10.3125 -5.0013 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.8375 -3.5724 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.3625 -2.1434 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.8875 -0.7145 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.4125 0.7145 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -13.6125 -7.8592 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -11.1375 -6.4302 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -8.6625 -5.0013 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.1875 -3.5724 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.7125 -2.1434 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.2375 -0.7145 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -14.0250 -8.5737 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -12.7875 -7.8592 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -11.5500 -7.1447 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -10.3125 -6.4302 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -9.0750 -5.7158 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.8375 -5.0013 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.6000 -4.2868 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.3625 -3.5724 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.1250 -2.8579 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.8875 -2.1434 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.6500 -1.4289 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.4125 -0.7145 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 0.8250 0.0000 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 1.2375 0.7145 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -14.8500 -8.5737 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -12.3750 -7.1447 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -9.9000 -5.7158 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.4250 -4.2868 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.9500 -2.8579 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.4750 -1.4289 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 0.0000 0.0000 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 0.8250 4.2868 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 1.9520 3.9849 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 0.5230 3.1599 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 1.9520 1.7309 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 0.5230 2.5559 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 0.8250 1.4289 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 1.6500 2.8579 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 1.2375 3.5724 0.0000 P 0 0 0 0 0 0 0 0 0 0 0 0 1.2375 2.1434 0.0000 P 0 0 0 0 0 0 0 0 0 0 0 0 -11.1375 -7.8592 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 -8.6625 -6.4302 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.1875 -5.0013 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.7125 -3.5724 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.2375 -2.1434 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 1.2375 -0.7145 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 15 9 1 0 0 0 0 16 9 1 0 0 0 0 17 10 1 0 0 0 0 18 10 1 0 0 0 0 19 11 1 0 0 0 0 20 11 1 0 0 0 0 21 12 1 0 0 0 0 22 12 1 0 0 0 0 23 13 1 0 0 0 0 24 13 1 0 0 0 0 25 14 1 0 0 0 0 26 14 1 0 0 0 0 28 27 1 0 0 0 0 29 1 1 0 0 0 0 29 2 1 0 0 0 0 29 15 2 0 0 0 0 30 3 1 0 0 0 0 30 16 1 0 0 0 0 30 17 2 0 0 0 0 31 4 1 0 0 0 0 31 18 1 0 0 0 0 31 19 2 0 0 0 0 32 5 1 0 0 0 0 32 20 1 0 0 0 0 32 21 2 0 0 0 0 33 6 1 0 0 0 0 33 22 1 0 0 0 0 33 23 2 0 0 0 0 34 7 1 0 0 0 0 34 24 1 0 0 0 0 34 25 2 0 0 0 0 35 8 1 0 0 0 0 35 26 1 0 0 0 0 35 27 2 0 0 0 0 41 28 1 0 0 0 0 43 36 1 0 0 0 0 43 37 1 0 0 0 0 43 38 2 0 0 0 0 43 42 1 0 0 0 0 44 39 1 0 0 0 0 44 40 2 0 0 0 0 44 41 1 0 0 0 0 44 42 1 0 0 0 0 45 17 1 0 0 0 0 46 19 1 0 0 0 0 47 21 1 0 0 0 0 48 23 1 0 0 0 0 49 25 1 0 0 0 0 50 27 1 0 0 0 0 M END 3D MOL for #<Metabolite:0x00007f923b7452c8>HMDB0012187 RDKit 3D all-trans-Heptaprenyl diphosphate 104103 0 0 0 0 0 0 0 0999 V2000 -11.1691 3.2717 -0.3136 C 0 0 0 0 0 0 0 0 0 0 0 0 -11.1648 1.7366 -0.3680 C 0 0 0 0 0 0 0 0 0 0 0 0 -12.1121 1.0735 0.5366 C 0 0 0 0 0 0 0 0 0 0 0 0 -10.4125 1.1842 -1.2734 C 0 0 0 0 0 0 0 0 0 0 0 0 -10.1815 -0.2649 -1.5432 C 0 0 0 0 0 0 0 0 0 0 0 0 -10.2862 -1.0294 -0.2272 C 0 0 0 0 0 0 0 0 0 0 0 0 -9.3172 -0.4614 0.7493 C 0 0 0 0 0 0 0 0 0 0 0 0 -9.3410 -0.9184 2.1693 C 0 0 0 0 0 0 0 0 0 0 0 0 -8.4036 0.4528 0.4505 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.4253 1.0415 1.4315 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.1334 0.3330 1.3783 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.5653 0.3508 -0.0168 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.0696 1.5650 -0.6758 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.4552 -0.8222 -0.5936 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.9669 -1.2164 -1.9066 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.6876 -2.0827 -1.6889 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.6537 -1.1303 -1.3195 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.2169 -0.2159 -2.4773 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.9199 -0.9764 -0.1915 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.9456 0.1400 -0.2024 C 0 0 0 0 0 0 0 0 0 0 0 0 0.4466 -0.1060 -0.4831 C 0 0 0 0 0 0 0 0 0 0 0 0 1.4704 -0.4640 0.4963 C 0 0 0 0 0 0 0 0 0 0 0 0 1.7133 0.6235 1.5124 C 0 0 0 0 0 0 0 0 0 0 0 0 2.1788 -1.5801 0.5465 C 0 0 0 0 0 0 0 0 0 0 0 0 3.2019 -1.6089 1.6812 C 0 0 0 0 0 0 0 0 0 0 0 0 4.3286 -0.7824 1.0437 C 0 0 0 0 0 0 0 0 0 0 0 0 5.1860 -1.4652 0.0753 C 0 0 0 0 0 0 0 0 0 0 0 0 4.7872 -2.6750 -0.6470 C 0 0 0 0 0 0 0 0 0 0 0 0 6.4893 -1.1043 -0.0257 C 0 0 0 0 0 0 0 0 0 0 0 0 7.3840 -1.7673 -0.9821 C 0 0 0 0 0 0 0 0 0 0 0 0 8.4576 -2.4725 -0.2105 C 0 0 0 0 0 0 0 0 0 0 0 0 9.4453 -1.6429 0.4893 C 0 0 0 0 0 0 0 0 0 0 0 0 10.3509 -2.4117 1.4435 C 0 0 0 0 0 0 0 0 0 0 0 0 9.6494 -0.3943 0.3076 C 0 0 0 0 0 0 0 0 0 0 0 0 10.6747 0.4485 1.0677 C 0 0 0 0 0 0 0 0 0 0 0 0 11.5741 0.8343 0.1421 O 0 0 0 0 0 0 0 0 0 0 0 0 11.3743 1.9781 -0.9833 P 0 0 0 0 0 5 0 0 0 0 0 0 11.2293 1.1147 -2.3490 O 0 0 0 0 0 0 0 0 0 0 0 0 10.0165 2.9172 -0.9684 O 0 0 0 0 0 0 0 0 0 0 0 0 12.8028 2.8669 -1.2265 O 0 0 0 0 0 0 0 0 0 0 0 0 13.3340 3.5603 0.2030 P 0 0 0 0 0 5 0 0 0 0 0 0 12.5970 2.8692 1.3542 O 0 0 0 0 0 0 0 0 0 0 0 0 14.9888 3.4192 0.4435 O 0 0 0 0 0 0 0 0 0 0 0 0 12.9006 5.2158 0.2329 O 0 0 0 0 0 0 0 0 0 0 0 0 -11.7854 3.6481 -1.1056 H 0 0 0 0 0 0 0 0 0 0 0 0 -11.4789 3.5434 0.7350 H 0 0 0 0 0 0 0 0 0 0 0 0 -10.0789 3.5557 -0.4393 H 0 0 0 0 0 0 0 0 0 0 0 0 -11.7489 0.6373 1.4514 H 0 0 0 0 0 0 0 0 0 0 0 0 -12.8699 1.8616 0.8917 H 0 0 0 0 0 0 0 0 0 0 0 0 -12.7676 0.4317 -0.1181 H 0 0 0 0 0 0 0 0 0 0 0 0 -9.8687 1.8757 -1.9530 H 0 0 0 0 0 0 0 0 0 0 0 0 -10.9468 -0.6486 -2.2383 H 0 0 0 0 0 0 0 0 0 0 0 0 -9.1856 -0.4161 -1.9772 H 0 0 0 0 0 0 0 0 0 0 0 0 -9.9342 -2.0920 -0.5040 H 0 0 0 0 0 0 0 0 0 0 0 0 -11.2746 -1.1455 0.1295 H 0 0 0 0 0 0 0 0 0 0 0 0 -8.3228 -0.9766 2.6079 H 0 0 0 0 0 0 0 0 0 0 0 0 -9.9053 -0.1713 2.7605 H 0 0 0 0 0 0 0 0 0 0 0 0 -9.7758 -1.9453 2.2387 H 0 0 0 0 0 0 0 0 0 0 0 0 -8.3209 0.7910 -0.5801 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.9020 1.1323 2.4094 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.2458 2.0984 1.0918 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.1711 -0.6850 1.7875 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.3700 0.8816 2.0041 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.9388 1.5863 -0.6061 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.3750 2.4505 -0.0385 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.4088 1.7379 -1.7000 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.8062 -1.7044 0.0203 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.6725 -0.2753 -2.4792 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.6948 -1.7060 -2.5548 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.4520 -2.6403 -2.6294 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.8981 -2.7923 -0.8698 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.9128 -0.2891 -3.3324 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.1037 0.7730 -2.1142 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.2627 -0.7149 -2.8585 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.1214 -1.6485 0.5948 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.2839 1.0969 -0.5886 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.9684 0.3997 0.9756 H 0 0 0 0 0 0 0 0 0 0 0 0 0.5687 -0.9060 -1.3174 H 0 0 0 0 0 0 0 0 0 0 0 0 0.9393 0.7836 -1.0616 H 0 0 0 0 0 0 0 0 0 0 0 0 2.1035 1.5569 0.9969 H 0 0 0 0 0 0 0 0 0 0 0 0 2.2974 0.4045 2.3549 H 0 0 0 0 0 0 0 0 0 0 0 0 0.6995 0.9574 1.8873 H 0 0 0 0 0 0 0 0 0 0 0 0 2.0365 -2.3652 -0.1218 H 0 0 0 0 0 0 0 0 0 0 0 0 2.8080 -1.2470 2.5810 H 0 0 0 0 0 0 0 0 0 0 0 0 3.4824 -2.6658 1.7932 H 0 0 0 0 0 0 0 0 0 0 0 0 4.9537 -0.4299 1.9002 H 0 0 0 0 0 0 0 0 0 0 0 0 3.8756 0.1106 0.5246 H 0 0 0 0 0 0 0 0 0 0 0 0 4.5295 -3.4756 0.1742 H 0 0 0 0 0 0 0 0 0 0 0 0 5.5971 -3.2176 -1.1761 H 0 0 0 0 0 0 0 0 0 0 0 0 3.9107 -2.5734 -1.2730 H 0 0 0 0 0 0 0 0 0 0 0 0 6.8414 -0.2935 0.5928 H 0 0 0 0 0 0 0 0 0 0 0 0 7.9154 -0.8727 -1.5044 H 0 0 0 0 0 0 0 0 0 0 0 0 7.0165 -2.3205 -1.8051 H 0 0 0 0 0 0 0 0 0 0 0 0 9.0042 -3.1501 -0.9468 H 0 0 0 0 0 0 0 0 0 0 0 0 7.9871 -3.1610 0.5072 H 0 0 0 0 0 0 0 0 0 0 0 0 10.5533 -3.4132 0.9594 H 0 0 0 0 0 0 0 0 0 0 0 0 9.9418 -2.4675 2.4446 H 0 0 0 0 0 0 0 0 0 0 0 0 11.3630 -1.9552 1.4885 H 0 0 0 0 0 0 0 0 0 0 0 0 9.0732 0.2139 -0.4266 H 0 0 0 0 0 0 0 0 0 0 0 0 10.1399 1.3531 1.5027 H 0 0 0 0 0 0 0 0 0 0 0 0 11.0523 -0.0843 1.9131 H 0 0 0 0 0 0 0 0 0 0 0 0 9.8244 3.4204 -0.1765 H 0 0 0 0 0 0 0 0 0 0 0 0 15.2910 2.4955 0.2505 H 0 0 0 0 0 0 0 0 0 0 0 0 11.8932 5.2485 0.1926 H 0 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 2 3 1 0 2 4 2 3 4 5 1 0 5 6 1 0 6 7 1 0 7 8 1 0 7 9 2 0 9 10 1 0 10 11 1 0 11 12 1 0 12 13 1 0 12 14 2 0 14 15 1 0 15 16 1 0 16 17 1 0 17 18 1 0 17 19 2 0 19 20 1 0 20 21 1 0 21 22 1 0 22 23 1 0 22 24 2 0 24 25 1 0 25 26 1 0 26 27 1 0 27 28 1 0 27 29 2 0 29 30 1 0 30 31 1 0 31 32 1 0 32 33 1 0 32 34 2 0 34 35 1 0 35 36 1 0 36 37 1 0 37 38 2 0 37 39 1 0 37 40 1 0 40 41 1 0 41 42 2 0 41 43 1 0 41 44 1 0 1 45 1 0 1 46 1 0 1 47 1 0 3 48 1 0 3 49 1 0 3 50 1 0 4 51 1 0 5 52 1 0 5 53 1 0 6 54 1 0 6 55 1 0 8 56 1 0 8 57 1 0 8 58 1 0 9 59 1 0 10 60 1 0 10 61 1 0 11 62 1 0 11 63 1 0 13 64 1 0 13 65 1 0 13 66 1 0 14 67 1 0 15 68 1 0 15 69 1 0 16 70 1 0 16 71 1 0 18 72 1 0 18 73 1 0 18 74 1 0 19 75 1 0 20 76 1 0 20 77 1 0 21 78 1 0 21 79 1 0 23 80 1 0 23 81 1 0 23 82 1 0 24 83 1 0 25 84 1 0 25 85 1 0 26 86 1 0 26 87 1 0 28 88 1 0 28 89 1 0 28 90 1 0 29 91 1 0 30 92 1 0 30 93 1 0 31 94 1 0 31 95 1 0 33 96 1 0 33 97 1 0 33 98 1 0 34 99 1 0 35100 1 0 35101 1 0 39102 1 0 43103 1 0 44104 1 0 M END 3D SDF for #<Metabolite:0x00007f923b7452c8>Mrv1652306222023372D 50 49 0 0 0 0 999 V2000 -15.2625 -9.2881 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -15.2625 -7.8592 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -12.7875 -6.4302 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -10.3125 -5.0013 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.8375 -3.5724 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.3625 -2.1434 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.8875 -0.7145 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.4125 0.7145 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -13.6125 -7.8592 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -11.1375 -6.4302 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -8.6625 -5.0013 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.1875 -3.5724 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.7125 -2.1434 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.2375 -0.7145 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -14.0250 -8.5737 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -12.7875 -7.8592 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -11.5500 -7.1447 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -10.3125 -6.4302 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -9.0750 -5.7158 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.8375 -5.0013 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.6000 -4.2868 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.3625 -3.5724 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.1250 -2.8579 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.8875 -2.1434 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.6500 -1.4289 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.4125 -0.7145 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 0.8250 0.0000 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 1.2375 0.7145 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -14.8500 -8.5737 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -12.3750 -7.1447 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -9.9000 -5.7158 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.4250 -4.2868 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.9500 -2.8579 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.4750 -1.4289 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 0.0000 0.0000 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 0.8250 4.2868 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 1.9520 3.9849 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 0.5230 3.1599 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 1.9520 1.7309 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 0.5230 2.5559 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 0.8250 1.4289 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 1.6500 2.8579 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 1.2375 3.5724 0.0000 P 0 0 0 0 0 0 0 0 0 0 0 0 1.2375 2.1434 0.0000 P 0 0 0 0 0 0 0 0 0 0 0 0 -11.1375 -7.8592 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 -8.6625 -6.4302 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.1875 -5.0013 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.7125 -3.5724 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.2375 -2.1434 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 1.2375 -0.7145 0.0000 H 0 0 0 0 0 0 0 0 0 0 0 0 15 9 1 0 0 0 0 16 9 1 0 0 0 0 17 10 1 0 0 0 0 18 10 1 0 0 0 0 19 11 1 0 0 0 0 20 11 1 0 0 0 0 21 12 1 0 0 0 0 22 12 1 0 0 0 0 23 13 1 0 0 0 0 24 13 1 0 0 0 0 25 14 1 0 0 0 0 26 14 1 0 0 0 0 28 27 1 0 0 0 0 29 1 1 0 0 0 0 29 2 1 0 0 0 0 29 15 2 0 0 0 0 30 3 1 0 0 0 0 30 16 1 0 0 0 0 30 17 2 0 0 0 0 31 4 1 0 0 0 0 31 18 1 0 0 0 0 31 19 2 0 0 0 0 32 5 1 0 0 0 0 32 20 1 0 0 0 0 32 21 2 0 0 0 0 33 6 1 0 0 0 0 33 22 1 0 0 0 0 33 23 2 0 0 0 0 34 7 1 0 0 0 0 34 24 1 0 0 0 0 34 25 2 0 0 0 0 35 8 1 0 0 0 0 35 26 1 0 0 0 0 35 27 2 0 0 0 0 41 28 1 0 0 0 0 43 36 1 0 0 0 0 43 37 1 0 0 0 0 43 38 2 0 0 0 0 43 42 1 0 0 0 0 44 39 1 0 0 0 0 44 40 2 0 0 0 0 44 41 1 0 0 0 0 44 42 1 0 0 0 0 45 17 1 0 0 0 0 46 19 1 0 0 0 0 47 21 1 0 0 0 0 48 23 1 0 0 0 0 49 25 1 0 0 0 0 50 27 1 0 0 0 0 M END > <DATABASE_ID> MMDBc0054332 > <DATABASE_NAME> MIME > <SMILES> [H]\C(CC\C(C)=C(/[H])CC\C(C)=C(/[H])CC\C(C)=C(/[H])CC\C(C)=C(/[H])CC\C(C)=C(/[H])COP(O)(=O)OP(O)(O)=O)=C(\C)CCC=C(C)C > <INCHI_IDENTIFIER> InChI=1S/C35H60O7P2/c1-29(2)15-9-16-30(3)17-10-18-31(4)19-11-20-32(5)21-12-22-33(6)23-13-24-34(7)25-14-26-35(8)27-28-41-44(39,40)42-43(36,37)38/h15,17,19,21,23,25,27H,9-14,16,18,20,22,24,26,28H2,1-8H3,(H,39,40)(H2,36,37,38)/b30-17+,31-19+,32-21+,33-23+,34-25+,35-27+ > <INCHI_KEY> LSJLEXWXRKTZAJ-YUIIPXGZSA-N > <FORMULA> C35H60O7P2 > <MOLECULAR_WEIGHT> 654.7942 > <EXACT_MASS> 654.381427298 > <JCHEM_ACCEPTOR_COUNT> 5 > <JCHEM_ATOM_COUNT> 104 > <JCHEM_AVERAGE_POLARIZABILITY> 75.59880111309207 > <JCHEM_BIOAVAILABILITY> 0 > <JCHEM_DONOR_COUNT> 3 > <JCHEM_FORMAL_CHARGE> 0 > <JCHEM_GHOSE_FILTER> 0 > <JCHEM_IUPAC> [({[(2E,6E,10E,14E,18E,22E)-3,7,11,15,19,23,27-heptamethyloctacosa-2,6,10,14,18,22,26-heptaen-1-yl]oxy}(hydroxy)phosphoryl)oxy]phosphonic acid > <ALOGPS_LOGP> 6.77 > <JCHEM_LOGP> 10.255590160666667 > <ALOGPS_LOGS> -6.19 > <JCHEM_MDDR_LIKE_RULE> 0 > <JCHEM_NUMBER_OF_RINGS> 0 > <JCHEM_PHYSIOLOGICAL_CHARGE> -2 > <JCHEM_PKA> 3.2043406094078315 > <JCHEM_PKA_STRONGEST_ACIDIC> 1.7672186885241006 > <JCHEM_POLAR_SURFACE_AREA> 113.29000000000002 > <JCHEM_REFRACTIVITY> 191.94090000000006 > <JCHEM_ROTATABLE_BOND_COUNT> 23 > <JCHEM_RULE_OF_FIVE> 0 > <ALOGPS_SOLUBILITY> 4.21e-04 g/l > <JCHEM_TRADITIONAL_IUPAC> {[(2E,6E,10E,14E,18E,22E)-3,7,11,15,19,23,27-heptamethyloctacosa-2,6,10,14,18,22,26-heptaen-1-yl]oxy(hydroxy)phosphoryl}oxyphosphonic acid > <JCHEM_VEBER_RULE> 0 $$$$ 3D-SDF for #<Metabolite:0x00007f923b7452c8>HMDB0012187 RDKit 3D all-trans-Heptaprenyl diphosphate 104103 0 0 0 0 0 0 0 0999 V2000 -11.1691 3.2717 -0.3136 C 0 0 0 0 0 0 0 0 0 0 0 0 -11.1648 1.7366 -0.3680 C 0 0 0 0 0 0 0 0 0 0 0 0 -12.1121 1.0735 0.5366 C 0 0 0 0 0 0 0 0 0 0 0 0 -10.4125 1.1842 -1.2734 C 0 0 0 0 0 0 0 0 0 0 0 0 -10.1815 -0.2649 -1.5432 C 0 0 0 0 0 0 0 0 0 0 0 0 -10.2862 -1.0294 -0.2272 C 0 0 0 0 0 0 0 0 0 0 0 0 -9.3172 -0.4614 0.7493 C 0 0 0 0 0 0 0 0 0 0 0 0 -9.3410 -0.9184 2.1693 C 0 0 0 0 0 0 0 0 0 0 0 0 -8.4036 0.4528 0.4505 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.4253 1.0415 1.4315 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.1334 0.3330 1.3783 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.5653 0.3508 -0.0168 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.0696 1.5650 -0.6758 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.4552 -0.8222 -0.5936 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.9669 -1.2164 -1.9066 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.6876 -2.0827 -1.6889 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.6537 -1.1303 -1.3195 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.2169 -0.2159 -2.4773 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.9199 -0.9764 -0.1915 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.9456 0.1400 -0.2024 C 0 0 0 0 0 0 0 0 0 0 0 0 0.4466 -0.1060 -0.4831 C 0 0 0 0 0 0 0 0 0 0 0 0 1.4704 -0.4640 0.4963 C 0 0 0 0 0 0 0 0 0 0 0 0 1.7133 0.6235 1.5124 C 0 0 0 0 0 0 0 0 0 0 0 0 2.1788 -1.5801 0.5465 C 0 0 0 0 0 0 0 0 0 0 0 0 3.2019 -1.6089 1.6812 C 0 0 0 0 0 0 0 0 0 0 0 0 4.3286 -0.7824 1.0437 C 0 0 0 0 0 0 0 0 0 0 0 0 5.1860 -1.4652 0.0753 C 0 0 0 0 0 0 0 0 0 0 0 0 4.7872 -2.6750 -0.6470 C 0 0 0 0 0 0 0 0 0 0 0 0 6.4893 -1.1043 -0.0257 C 0 0 0 0 0 0 0 0 0 0 0 0 7.3840 -1.7673 -0.9821 C 0 0 0 0 0 0 0 0 0 0 0 0 8.4576 -2.4725 -0.2105 C 0 0 0 0 0 0 0 0 0 0 0 0 9.4453 -1.6429 0.4893 C 0 0 0 0 0 0 0 0 0 0 0 0 10.3509 -2.4117 1.4435 C 0 0 0 0 0 0 0 0 0 0 0 0 9.6494 -0.3943 0.3076 C 0 0 0 0 0 0 0 0 0 0 0 0 10.6747 0.4485 1.0677 C 0 0 0 0 0 0 0 0 0 0 0 0 11.5741 0.8343 0.1421 O 0 0 0 0 0 0 0 0 0 0 0 0 11.3743 1.9781 -0.9833 P 0 0 0 0 0 5 0 0 0 0 0 0 11.2293 1.1147 -2.3490 O 0 0 0 0 0 0 0 0 0 0 0 0 10.0165 2.9172 -0.9684 O 0 0 0 0 0 0 0 0 0 0 0 0 12.8028 2.8669 -1.2265 O 0 0 0 0 0 0 0 0 0 0 0 0 13.3340 3.5603 0.2030 P 0 0 0 0 0 5 0 0 0 0 0 0 12.5970 2.8692 1.3542 O 0 0 0 0 0 0 0 0 0 0 0 0 14.9888 3.4192 0.4435 O 0 0 0 0 0 0 0 0 0 0 0 0 12.9006 5.2158 0.2329 O 0 0 0 0 0 0 0 0 0 0 0 0 -11.7854 3.6481 -1.1056 H 0 0 0 0 0 0 0 0 0 0 0 0 -11.4789 3.5434 0.7350 H 0 0 0 0 0 0 0 0 0 0 0 0 -10.0789 3.5557 -0.4393 H 0 0 0 0 0 0 0 0 0 0 0 0 -11.7489 0.6373 1.4514 H 0 0 0 0 0 0 0 0 0 0 0 0 -12.8699 1.8616 0.8917 H 0 0 0 0 0 0 0 0 0 0 0 0 -12.7676 0.4317 -0.1181 H 0 0 0 0 0 0 0 0 0 0 0 0 -9.8687 1.8757 -1.9530 H 0 0 0 0 0 0 0 0 0 0 0 0 -10.9468 -0.6486 -2.2383 H 0 0 0 0 0 0 0 0 0 0 0 0 -9.1856 -0.4161 -1.9772 H 0 0 0 0 0 0 0 0 0 0 0 0 -9.9342 -2.0920 -0.5040 H 0 0 0 0 0 0 0 0 0 0 0 0 -11.2746 -1.1455 0.1295 H 0 0 0 0 0 0 0 0 0 0 0 0 -8.3228 -0.9766 2.6079 H 0 0 0 0 0 0 0 0 0 0 0 0 -9.9053 -0.1713 2.7605 H 0 0 0 0 0 0 0 0 0 0 0 0 -9.7758 -1.9453 2.2387 H 0 0 0 0 0 0 0 0 0 0 0 0 -8.3209 0.7910 -0.5801 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.9020 1.1323 2.4094 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.2458 2.0984 1.0918 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.1711 -0.6850 1.7875 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.3700 0.8816 2.0041 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.9388 1.5863 -0.6061 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.3750 2.4505 -0.0385 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.4088 1.7379 -1.7000 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.8062 -1.7044 0.0203 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.6725 -0.2753 -2.4792 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.6948 -1.7060 -2.5548 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.4520 -2.6403 -2.6294 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.8981 -2.7923 -0.8698 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.9128 -0.2891 -3.3324 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.1037 0.7730 -2.1142 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.2627 -0.7149 -2.8585 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.1214 -1.6485 0.5948 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.2839 1.0969 -0.5886 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.9684 0.3997 0.9756 H 0 0 0 0 0 0 0 0 0 0 0 0 0.5687 -0.9060 -1.3174 H 0 0 0 0 0 0 0 0 0 0 0 0 0.9393 0.7836 -1.0616 H 0 0 0 0 0 0 0 0 0 0 0 0 2.1035 1.5569 0.9969 H 0 0 0 0 0 0 0 0 0 0 0 0 2.2974 0.4045 2.3549 H 0 0 0 0 0 0 0 0 0 0 0 0 0.6995 0.9574 1.8873 H 0 0 0 0 0 0 0 0 0 0 0 0 2.0365 -2.3652 -0.1218 H 0 0 0 0 0 0 0 0 0 0 0 0 2.8080 -1.2470 2.5810 H 0 0 0 0 0 0 0 0 0 0 0 0 3.4824 -2.6658 1.7932 H 0 0 0 0 0 0 0 0 0 0 0 0 4.9537 -0.4299 1.9002 H 0 0 0 0 0 0 0 0 0 0 0 0 3.8756 0.1106 0.5246 H 0 0 0 0 0 0 0 0 0 0 0 0 4.5295 -3.4756 0.1742 H 0 0 0 0 0 0 0 0 0 0 0 0 5.5971 -3.2176 -1.1761 H 0 0 0 0 0 0 0 0 0 0 0 0 3.9107 -2.5734 -1.2730 H 0 0 0 0 0 0 0 0 0 0 0 0 6.8414 -0.2935 0.5928 H 0 0 0 0 0 0 0 0 0 0 0 0 7.9154 -0.8727 -1.5044 H 0 0 0 0 0 0 0 0 0 0 0 0 7.0165 -2.3205 -1.8051 H 0 0 0 0 0 0 0 0 0 0 0 0 9.0042 -3.1501 -0.9468 H 0 0 0 0 0 0 0 0 0 0 0 0 7.9871 -3.1610 0.5072 H 0 0 0 0 0 0 0 0 0 0 0 0 10.5533 -3.4132 0.9594 H 0 0 0 0 0 0 0 0 0 0 0 0 9.9418 -2.4675 2.4446 H 0 0 0 0 0 0 0 0 0 0 0 0 11.3630 -1.9552 1.4885 H 0 0 0 0 0 0 0 0 0 0 0 0 9.0732 0.2139 -0.4266 H 0 0 0 0 0 0 0 0 0 0 0 0 10.1399 1.3531 1.5027 H 0 0 0 0 0 0 0 0 0 0 0 0 11.0523 -0.0843 1.9131 H 0 0 0 0 0 0 0 0 0 0 0 0 9.8244 3.4204 -0.1765 H 0 0 0 0 0 0 0 0 0 0 0 0 15.2910 2.4955 0.2505 H 0 0 0 0 0 0 0 0 0 0 0 0 11.8932 5.2485 0.1926 H 0 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 2 3 1 0 2 4 2 3 4 5 1 0 5 6 1 0 6 7 1 0 7 8 1 0 7 9 2 0 9 10 1 0 10 11 1 0 11 12 1 0 12 13 1 0 12 14 2 0 14 15 1 0 15 16 1 0 16 17 1 0 17 18 1 0 17 19 2 0 19 20 1 0 20 21 1 0 21 22 1 0 22 23 1 0 22 24 2 0 24 25 1 0 25 26 1 0 26 27 1 0 27 28 1 0 27 29 2 0 29 30 1 0 30 31 1 0 31 32 1 0 32 33 1 0 32 34 2 0 34 35 1 0 35 36 1 0 36 37 1 0 37 38 2 0 37 39 1 0 37 40 1 0 40 41 1 0 41 42 2 0 41 43 1 0 41 44 1 0 1 45 1 0 1 46 1 0 1 47 1 0 3 48 1 0 3 49 1 0 3 50 1 0 4 51 1 0 5 52 1 0 5 53 1 0 6 54 1 0 6 55 1 0 8 56 1 0 8 57 1 0 8 58 1 0 9 59 1 0 10 60 1 0 10 61 1 0 11 62 1 0 11 63 1 0 13 64 1 0 13 65 1 0 13 66 1 0 14 67 1 0 15 68 1 0 15 69 1 0 16 70 1 0 16 71 1 0 18 72 1 0 18 73 1 0 18 74 1 0 19 75 1 0 20 76 1 0 20 77 1 0 21 78 1 0 21 79 1 0 23 80 1 0 23 81 1 0 23 82 1 0 24 83 1 0 25 84 1 0 25 85 1 0 26 86 1 0 26 87 1 0 28 88 1 0 28 89 1 0 28 90 1 0 29 91 1 0 30 92 1 0 30 93 1 0 31 94 1 0 31 95 1 0 33 96 1 0 33 97 1 0 33 98 1 0 34 99 1 0 35100 1 0 35101 1 0 39102 1 0 43103 1 0 44104 1 0 M END PDB for #<Metabolite:0x00007f923b7452c8>HEADER PROTEIN 22-JUN-20 NONE TITLE NULL COMPND NULL SOURCE NULL KEYWDS NULL EXPDTA NULL AUTHOR Marvin REVDAT 1 22-JUN-20 0 HETATM 1 C UNK 0 -28.490 -17.338 0.000 0.00 0.00 C+0 HETATM 2 C UNK 0 -28.490 -14.671 0.000 0.00 0.00 C+0 HETATM 3 C UNK 0 -23.870 -12.003 0.000 0.00 0.00 C+0 HETATM 4 C UNK 0 -19.250 -9.336 0.000 0.00 0.00 C+0 HETATM 5 C UNK 0 -14.630 -6.668 0.000 0.00 0.00 C+0 HETATM 6 C UNK 0 -10.010 -4.001 0.000 0.00 0.00 C+0 HETATM 7 C UNK 0 -5.390 -1.334 0.000 0.00 0.00 C+0 HETATM 8 C UNK 0 -0.770 1.334 0.000 0.00 0.00 C+0 HETATM 9 C UNK 0 -25.410 -14.671 0.000 0.00 0.00 C+0 HETATM 10 C UNK 0 -20.790 -12.003 0.000 0.00 0.00 C+0 HETATM 11 C UNK 0 -16.170 -9.336 0.000 0.00 0.00 C+0 HETATM 12 C UNK 0 -11.550 -6.668 0.000 0.00 0.00 C+0 HETATM 13 C UNK 0 -6.930 -4.001 0.000 0.00 0.00 C+0 HETATM 14 C UNK 0 -2.310 -1.334 0.000 0.00 0.00 C+0 HETATM 15 C UNK 0 -26.180 -16.004 0.000 0.00 0.00 C+0 HETATM 16 C UNK 0 -23.870 -14.671 0.000 0.00 0.00 C+0 HETATM 17 C UNK 0 -21.560 -13.337 0.000 0.00 0.00 C+0 HETATM 18 C UNK 0 -19.250 -12.003 0.000 0.00 0.00 C+0 HETATM 19 C UNK 0 -16.940 -10.669 0.000 0.00 0.00 C+0 HETATM 20 C UNK 0 -14.630 -9.336 0.000 0.00 0.00 C+0 HETATM 21 C UNK 0 -12.320 -8.002 0.000 0.00 0.00 C+0 HETATM 22 C UNK 0 -10.010 -6.668 0.000 0.00 0.00 C+0 HETATM 23 C UNK 0 -7.700 -5.335 0.000 0.00 0.00 C+0 HETATM 24 C UNK 0 -5.390 -4.001 0.000 0.00 0.00 C+0 HETATM 25 C UNK 0 -3.080 -2.667 0.000 0.00 0.00 C+0 HETATM 26 C UNK 0 -0.770 -1.334 0.000 0.00 0.00 C+0 HETATM 27 C UNK 0 1.540 0.000 0.000 0.00 0.00 C+0 HETATM 28 C UNK 0 2.310 1.334 0.000 0.00 0.00 C+0 HETATM 29 C UNK 0 -27.720 -16.004 0.000 0.00 0.00 C+0 HETATM 30 C UNK 0 -23.100 -13.337 0.000 0.00 0.00 C+0 HETATM 31 C UNK 0 -18.480 -10.669 0.000 0.00 0.00 C+0 HETATM 32 C UNK 0 -13.860 -8.002 0.000 0.00 0.00 C+0 HETATM 33 C UNK 0 -9.240 -5.335 0.000 0.00 0.00 C+0 HETATM 34 C UNK 0 -4.620 -2.667 0.000 0.00 0.00 C+0 HETATM 35 C UNK 0 0.000 0.000 0.000 0.00 0.00 C+0 HETATM 36 O UNK 0 1.540 8.002 0.000 0.00 0.00 O+0 HETATM 37 O UNK 0 3.644 7.438 0.000 0.00 0.00 O+0 HETATM 38 O UNK 0 0.976 5.898 0.000 0.00 0.00 O+0 HETATM 39 O UNK 0 3.644 3.231 0.000 0.00 0.00 O+0 HETATM 40 O UNK 0 0.976 4.771 0.000 0.00 0.00 O+0 HETATM 41 O UNK 0 1.540 2.667 0.000 0.00 0.00 O+0 HETATM 42 O UNK 0 3.080 5.335 0.000 0.00 0.00 O+0 HETATM 43 P UNK 0 2.310 6.668 0.000 0.00 0.00 P+0 HETATM 44 P UNK 0 2.310 4.001 0.000 0.00 0.00 P+0 HETATM 45 H UNK 0 -20.790 -14.671 0.000 0.00 0.00 H+0 HETATM 46 H UNK 0 -16.170 -12.003 0.000 0.00 0.00 H+0 HETATM 47 H UNK 0 -11.550 -9.336 0.000 0.00 0.00 H+0 HETATM 48 H UNK 0 -6.930 -6.668 0.000 0.00 0.00 H+0 HETATM 49 H UNK 0 -2.310 -4.001 0.000 0.00 0.00 H+0 HETATM 50 H UNK 0 2.310 -1.334 0.000 0.00 0.00 H+0 CONECT 1 29 CONECT 2 29 CONECT 3 30 CONECT 4 31 CONECT 5 32 CONECT 6 33 CONECT 7 34 CONECT 8 35 CONECT 9 15 16 CONECT 10 17 18 CONECT 11 19 20 CONECT 12 21 22 CONECT 13 23 24 CONECT 14 25 26 CONECT 15 9 29 CONECT 16 9 30 CONECT 17 10 30 45 CONECT 18 10 31 CONECT 19 11 31 46 CONECT 20 11 32 CONECT 21 12 32 47 CONECT 22 12 33 CONECT 23 13 33 48 CONECT 24 13 34 CONECT 25 14 34 49 CONECT 26 14 35 CONECT 27 28 35 50 CONECT 28 27 41 CONECT 29 1 2 15 CONECT 30 3 16 17 CONECT 31 4 18 19 CONECT 32 5 20 21 CONECT 33 6 22 23 CONECT 34 7 24 25 CONECT 35 8 26 27 CONECT 36 43 CONECT 37 43 CONECT 38 43 CONECT 39 44 CONECT 40 44 CONECT 41 28 44 CONECT 42 43 44 CONECT 43 36 37 38 42 CONECT 44 39 40 41 42 CONECT 45 17 CONECT 46 19 CONECT 47 21 CONECT 48 23 CONECT 49 25 CONECT 50 27 MASTER 0 0 0 0 0 0 0 0 50 0 98 0 END 3D PDB for #<Metabolite:0x00007f923b7452c8>COMPND HMDB0012187 HETATM 1 C1 UNL 1 -11.169 3.272 -0.314 1.00 0.00 C HETATM 2 C2 UNL 1 -11.165 1.737 -0.368 1.00 0.00 C HETATM 3 C3 UNL 1 -12.112 1.073 0.537 1.00 0.00 C HETATM 4 C4 UNL 1 -10.413 1.184 -1.273 1.00 0.00 C HETATM 5 C5 UNL 1 -10.182 -0.265 -1.543 1.00 0.00 C HETATM 6 C6 UNL 1 -10.286 -1.029 -0.227 1.00 0.00 C HETATM 7 C7 UNL 1 -9.317 -0.461 0.749 1.00 0.00 C HETATM 8 C8 UNL 1 -9.341 -0.918 2.169 1.00 0.00 C HETATM 9 C9 UNL 1 -8.404 0.453 0.450 1.00 0.00 C HETATM 10 C10 UNL 1 -7.425 1.041 1.432 1.00 0.00 C HETATM 11 C11 UNL 1 -6.133 0.333 1.378 1.00 0.00 C HETATM 12 C12 UNL 1 -5.565 0.351 -0.017 1.00 0.00 C HETATM 13 C13 UNL 1 -5.070 1.565 -0.676 1.00 0.00 C HETATM 14 C14 UNL 1 -5.455 -0.822 -0.594 1.00 0.00 C HETATM 15 C15 UNL 1 -4.967 -1.216 -1.907 1.00 0.00 C HETATM 16 C16 UNL 1 -3.688 -2.083 -1.689 1.00 0.00 C HETATM 17 C17 UNL 1 -2.654 -1.130 -1.320 1.00 0.00 C HETATM 18 C18 UNL 1 -2.217 -0.216 -2.477 1.00 0.00 C HETATM 19 C19 UNL 1 -1.920 -0.976 -0.191 1.00 0.00 C HETATM 20 C20 UNL 1 -0.946 0.140 -0.202 1.00 0.00 C HETATM 21 C21 UNL 1 0.447 -0.106 -0.483 1.00 0.00 C HETATM 22 C22 UNL 1 1.470 -0.464 0.496 1.00 0.00 C HETATM 23 C23 UNL 1 1.713 0.624 1.512 1.00 0.00 C HETATM 24 C24 UNL 1 2.179 -1.580 0.547 1.00 0.00 C HETATM 25 C25 UNL 1 3.202 -1.609 1.681 1.00 0.00 C HETATM 26 C26 UNL 1 4.329 -0.782 1.044 1.00 0.00 C HETATM 27 C27 UNL 1 5.186 -1.465 0.075 1.00 0.00 C HETATM 28 C28 UNL 1 4.787 -2.675 -0.647 1.00 0.00 C HETATM 29 C29 UNL 1 6.489 -1.104 -0.026 1.00 0.00 C HETATM 30 C30 UNL 1 7.384 -1.767 -0.982 1.00 0.00 C HETATM 31 C31 UNL 1 8.458 -2.473 -0.211 1.00 0.00 C HETATM 32 C32 UNL 1 9.445 -1.643 0.489 1.00 0.00 C HETATM 33 C33 UNL 1 10.351 -2.412 1.444 1.00 0.00 C HETATM 34 C34 UNL 1 9.649 -0.394 0.308 1.00 0.00 C HETATM 35 C35 UNL 1 10.675 0.449 1.068 1.00 0.00 C HETATM 36 O1 UNL 1 11.574 0.834 0.142 1.00 0.00 O HETATM 37 P1 UNL 1 11.374 1.978 -0.983 1.00 0.00 P HETATM 38 O2 UNL 1 11.229 1.115 -2.349 1.00 0.00 O HETATM 39 O3 UNL 1 10.017 2.917 -0.968 1.00 0.00 O HETATM 40 O4 UNL 1 12.803 2.867 -1.226 1.00 0.00 O HETATM 41 P2 UNL 1 13.334 3.560 0.203 1.00 0.00 P HETATM 42 O5 UNL 1 12.597 2.869 1.354 1.00 0.00 O HETATM 43 O6 UNL 1 14.989 3.419 0.444 1.00 0.00 O HETATM 44 O7 UNL 1 12.901 5.216 0.233 1.00 0.00 O HETATM 45 H1 UNL 1 -11.785 3.648 -1.106 1.00 0.00 H HETATM 46 H2 UNL 1 -11.479 3.543 0.735 1.00 0.00 H HETATM 47 H3 UNL 1 -10.079 3.556 -0.439 1.00 0.00 H HETATM 48 H4 UNL 1 -11.749 0.637 1.451 1.00 0.00 H HETATM 49 H5 UNL 1 -12.870 1.862 0.892 1.00 0.00 H HETATM 50 H6 UNL 1 -12.768 0.432 -0.118 1.00 0.00 H HETATM 51 H7 UNL 1 -9.869 1.876 -1.953 1.00 0.00 H HETATM 52 H8 UNL 1 -10.947 -0.649 -2.238 1.00 0.00 H HETATM 53 H9 UNL 1 -9.186 -0.416 -1.977 1.00 0.00 H HETATM 54 H10 UNL 1 -9.934 -2.092 -0.504 1.00 0.00 H HETATM 55 H11 UNL 1 -11.275 -1.146 0.129 1.00 0.00 H HETATM 56 H12 UNL 1 -8.323 -0.977 2.608 1.00 0.00 H HETATM 57 H13 UNL 1 -9.905 -0.171 2.761 1.00 0.00 H HETATM 58 H14 UNL 1 -9.776 -1.945 2.239 1.00 0.00 H HETATM 59 H15 UNL 1 -8.321 0.791 -0.580 1.00 0.00 H HETATM 60 H16 UNL 1 -7.902 1.132 2.409 1.00 0.00 H HETATM 61 H17 UNL 1 -7.246 2.098 1.092 1.00 0.00 H HETATM 62 H18 UNL 1 -6.171 -0.685 1.787 1.00 0.00 H HETATM 63 H19 UNL 1 -5.370 0.882 2.004 1.00 0.00 H HETATM 64 H20 UNL 1 -3.939 1.586 -0.606 1.00 0.00 H HETATM 65 H21 UNL 1 -5.375 2.451 -0.038 1.00 0.00 H HETATM 66 H22 UNL 1 -5.409 1.738 -1.700 1.00 0.00 H HETATM 67 H23 UNL 1 -5.806 -1.704 0.020 1.00 0.00 H HETATM 68 H24 UNL 1 -4.673 -0.275 -2.479 1.00 0.00 H HETATM 69 H25 UNL 1 -5.695 -1.706 -2.555 1.00 0.00 H HETATM 70 H26 UNL 1 -3.452 -2.640 -2.629 1.00 0.00 H HETATM 71 H27 UNL 1 -3.898 -2.792 -0.870 1.00 0.00 H HETATM 72 H28 UNL 1 -2.913 -0.289 -3.332 1.00 0.00 H HETATM 73 H29 UNL 1 -2.104 0.773 -2.114 1.00 0.00 H HETATM 74 H30 UNL 1 -1.263 -0.715 -2.859 1.00 0.00 H HETATM 75 H31 UNL 1 -2.121 -1.648 0.595 1.00 0.00 H HETATM 76 H32 UNL 1 -1.284 1.097 -0.589 1.00 0.00 H HETATM 77 H33 UNL 1 -0.968 0.400 0.976 1.00 0.00 H HETATM 78 H34 UNL 1 0.569 -0.906 -1.317 1.00 0.00 H HETATM 79 H35 UNL 1 0.939 0.784 -1.062 1.00 0.00 H HETATM 80 H36 UNL 1 2.104 1.557 0.997 1.00 0.00 H HETATM 81 H37 UNL 1 2.297 0.405 2.355 1.00 0.00 H HETATM 82 H38 UNL 1 0.699 0.957 1.887 1.00 0.00 H HETATM 83 H39 UNL 1 2.037 -2.365 -0.122 1.00 0.00 H HETATM 84 H40 UNL 1 2.808 -1.247 2.581 1.00 0.00 H HETATM 85 H41 UNL 1 3.482 -2.666 1.793 1.00 0.00 H HETATM 86 H42 UNL 1 4.954 -0.430 1.900 1.00 0.00 H HETATM 87 H43 UNL 1 3.876 0.111 0.525 1.00 0.00 H HETATM 88 H44 UNL 1 4.529 -3.476 0.174 1.00 0.00 H HETATM 89 H45 UNL 1 5.597 -3.218 -1.176 1.00 0.00 H HETATM 90 H46 UNL 1 3.911 -2.573 -1.273 1.00 0.00 H HETATM 91 H47 UNL 1 6.841 -0.293 0.593 1.00 0.00 H HETATM 92 H48 UNL 1 7.915 -0.873 -1.504 1.00 0.00 H HETATM 93 H49 UNL 1 7.017 -2.321 -1.805 1.00 0.00 H HETATM 94 H50 UNL 1 9.004 -3.150 -0.947 1.00 0.00 H HETATM 95 H51 UNL 1 7.987 -3.161 0.507 1.00 0.00 H HETATM 96 H52 UNL 1 10.553 -3.413 0.959 1.00 0.00 H HETATM 97 H53 UNL 1 9.942 -2.467 2.445 1.00 0.00 H HETATM 98 H54 UNL 1 11.363 -1.955 1.488 1.00 0.00 H HETATM 99 H55 UNL 1 9.073 0.214 -0.427 1.00 0.00 H HETATM 100 H56 UNL 1 10.140 1.353 1.503 1.00 0.00 H HETATM 101 H57 UNL 1 11.052 -0.084 1.913 1.00 0.00 H HETATM 102 H58 UNL 1 9.824 3.420 -0.176 1.00 0.00 H HETATM 103 H59 UNL 1 15.291 2.495 0.251 1.00 0.00 H HETATM 104 H60 UNL 1 11.893 5.248 0.193 1.00 0.00 H CONECT 1 2 45 46 47 CONECT 2 3 4 4 CONECT 3 48 49 50 CONECT 4 5 51 CONECT 5 6 52 53 CONECT 6 7 54 55 CONECT 7 8 9 9 CONECT 8 56 57 58 CONECT 9 10 59 CONECT 10 11 60 61 CONECT 11 12 62 63 CONECT 12 13 14 14 CONECT 13 64 65 66 CONECT 14 15 67 CONECT 15 16 68 69 CONECT 16 17 70 71 CONECT 17 18 19 19 CONECT 18 72 73 74 CONECT 19 20 75 CONECT 20 21 76 77 CONECT 21 22 78 79 CONECT 22 23 24 24 CONECT 23 80 81 82 CONECT 24 25 83 CONECT 25 26 84 85 CONECT 26 27 86 87 CONECT 27 28 29 29 CONECT 28 88 89 90 CONECT 29 30 91 CONECT 30 31 92 93 CONECT 31 32 94 95 CONECT 32 33 34 34 CONECT 33 96 97 98 CONECT 34 35 99 CONECT 35 36 100 101 CONECT 36 37 CONECT 37 38 38 39 40 CONECT 39 102 CONECT 40 41 CONECT 41 42 42 43 44 CONECT 43 103 CONECT 44 104 END SMILES for #<Metabolite:0x00007f923b7452c8>[H]\C(CC\C(C)=C(/[H])CC\C(C)=C(/[H])CC\C(C)=C(/[H])CC\C(C)=C(/[H])CC\C(C)=C(/[H])COP(O)(=O)OP(O)(O)=O)=C(\C)CCC=C(C)C INCHI for #<Metabolite:0x00007f923b7452c8>InChI=1S/C35H60O7P2/c1-29(2)15-9-16-30(3)17-10-18-31(4)19-11-20-32(5)21-12-22-33(6)23-13-24-34(7)25-14-26-35(8)27-28-41-44(39,40)42-43(36,37)38/h15,17,19,21,23,25,27H,9-14,16,18,20,22,24,26,28H2,1-8H3,(H,39,40)(H2,36,37,38)/b30-17+,31-19+,32-21+,33-23+,34-25+,35-27+ 3D Structure for #<Metabolite:0x00007f923b7452c8> | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Synonyms |
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Molecular Formula | C35H60O7P2 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Average Mass | 654.7942 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Monoisotopic Mass | 654.381427298 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IUPAC Name | [({[(2E,6E,10E,14E,18E,22E)-3,7,11,15,19,23,27-heptamethyloctacosa-2,6,10,14,18,22,26-heptaen-1-yl]oxy}(hydroxy)phosphoryl)oxy]phosphonic acid | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Traditional Name | {[(2E,6E,10E,14E,18E,22E)-3,7,11,15,19,23,27-heptamethyloctacosa-2,6,10,14,18,22,26-heptaen-1-yl]oxy(hydroxy)phosphoryl}oxyphosphonic acid | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
CAS Registry Number | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SMILES | [H]\C(CC\C(C)=C(/[H])CC\C(C)=C(/[H])CC\C(C)=C(/[H])CC\C(C)=C(/[H])CC\C(C)=C(/[H])COP(O)(=O)OP(O)(O)=O)=C(\C)CCC=C(C)C | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
InChI Identifier | InChI=1S/C35H60O7P2/c1-29(2)15-9-16-30(3)17-10-18-31(4)19-11-20-32(5)21-12-22-33(6)23-13-24-34(7)25-14-26-35(8)27-28-41-44(39,40)42-43(36,37)38/h15,17,19,21,23,25,27H,9-14,16,18,20,22,24,26,28H2,1-8H3,(H,39,40)(H2,36,37,38)/b30-17+,31-19+,32-21+,33-23+,34-25+,35-27+ | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
InChI Key | LSJLEXWXRKTZAJ-YUIIPXGZSA-N | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Chemical Taxonomy | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Description | Belongs to the class of organic compounds known as bactoprenol diphosphates. These are polyprenyl compounds consisting of a diphosphate group substituted by a bactoprenyl moiety. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Kingdom | Organic compounds | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Super Class | Lipids and lipid-like molecules | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Class | Prenol lipids | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sub Class | Polyprenols | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Direct Parent | Bactoprenol diphosphates | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Alternative Parents | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Substituents |
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Molecular Framework | Aliphatic acyclic compounds | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
External Descriptors |
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Functional Ontology | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Physical Properties | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
State | Expected Solid | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Predicted Properties |
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Spectra | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Not Available | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Biological Properties | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Cellular Locations |
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Biospecimen Locations | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Tissue Locations | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Associated OMIM IDs | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Human Proteins and Enzymes | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Human Pathways | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Pathways |
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Metabolic Reactions | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Reactions
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Health Effects and Bioactivity | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Microbial Sources | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Exposure Sources | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Other Exposures |
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Host Biospecimen and Location | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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External Links | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
HMDB ID | HMDB0012187 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
DrugBank ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Phenol Explorer Compound ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
FooDB ID | FDB028839 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
KNApSAcK ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Chemspider ID | 4444257 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
KEGG Compound ID | C04216 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
BioCyc ID | ALL-TRANS-HEPTAPRENYL-DIPHOSPHATE | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
BiGG ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Wikipedia Link | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
METLIN ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
PubChem Compound | 5280658 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
PDB ID | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
ChEBI ID | 17613 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Food Biomarker Ontology | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
References | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Synthesis Reference | Not Available | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
General References |
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