| MMDBm0000334 | Pseudomonas putida | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0000368 | Shigella flexneri | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0000484 | Moorella thermoacetica | Eubacteria | Firmicutes | Not Available | Not Available | RHEA |
| MMDBm0000528 | Streptomyces lividans | Eubacteria | Actinobacteria | Not Available | Not Available | RHEA |
| MMDBm0001209 | Vibrio fischeri ES114 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001231 | Aquifex aeolicus VF5 | Eubacteria | Aquificae | Not Available | Not Available | RHEA |
| MMDBm0001248 | Bacillus subtilis subsp. subtilis str. 168 | Eubacteria | Firmicutes | Human Feces | Not Available | RHEA |
| MMDBm0001322 | Buchnera aphidicola str. APS (Acyrthosiphon pisum) | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001323 | Buchnera aphidicola str. Sg (Schizaphis graminum) | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001324 | Buchnera aphidicola str. Bp (Baizongia pistaciae) | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001390 | Candidatus Pelagibacter ubique HTCC1062 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001658 | Haemophilus influenzae Rd KW20 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001880 | Mycobacterium tuberculosis H37Rv | Eubacteria | Actinobacteria | Human | Not Available | RHEA |
| MMDBm0001881 | Mycobacterium leprae TN | Eubacteria | Actinobacteria | Human | Not Available | RHEA |
| MMDBm0001929 | Neisseria meningitidis MC58 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0002159 | Sphingobium sp. SYK-6 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0002391 | Pseudomonas aeruginosa PAO1 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0002482 | Ruegeria pomeroyi DSS-3 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0002492 | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0002739 | Vibrio cholerae O1 biovar El Tor str. N16961 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0002740 | Vibrio vulnificus CMCP6 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0002741 | Vibrio parahaemolyticus RIMD 2210633 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0002742 | Vibrio vulnificus YJ016 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0098378 | Saccharomyces cerevisiae S288C | Fungi | Ascomycota | Not Available | Not Available | RHEA |
| MMDBm0101577 | Schizosaccharomyces pombe 972h- | Fungi | Ascomycota | Not Available | Not Available | RHEA |
