| MMDBm0000194 | Klebsiella aerogenes KCTC 2190 | Eubacteria | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0000334 | Pseudomonas putida | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001067 | Klebsiella variicola | Eubacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001188 | Acinetobacter baumannii AB0057 | Eubacteria | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0001200 | Agrobacterium tumefaciens str. C58 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001201 | Agrobacterium vitis S4 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001313 | Brucella suis 1330 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001336 | Burkholderia ambifaria AMMD | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001337 | Burkholderia cenocepacia HI2424 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001344 | Burkholderia multivorans ATCC 17616 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0001479 | Colwellia psychrerythraea 34H | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001574 | Enterobacter asburiae LF7a | Eubacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0002164 | Acinetobacter calcoaceticus PHEA-2 | Eubacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0002342 | Paracoccus denitrificans PD1222 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0002391 | Pseudomonas aeruginosa PAO1 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0002393 | Pseudomonas fluorescens Pf-5 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0002522 | Shewanella pealeana ATCC 700345 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0002525 | Shewanella woodyi ATCC 51908 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0002538 | Sinorhizobium meliloti 1021 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0002579 | Starkeya novella DSM 506 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0452845 | Labrenzia aggregata IAM 12614 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0462330 | Azospirillum brasilense | Bacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0483496 | Burkholderia cepacia GG4 | Eubacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0509991 | Bilophila wadsworthia 3_1_6 | Eubacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0516564 | Aeromonas media WS | Eubacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
