| MMDBm0000028 | Bacillus halodurans C-125 | Eubacteria | Firmicutes | Human Feces | Not Available | RHEA |
| MMDBm0000160 | Escherichia coli | Eubacteria | Proteobacteria | Human | Indirect association between microbiota composition and metabolites measured in host biospecimen | Not Available |
| MMDBm0001155 | Lachnospiraceae bacterium 5_1_57FAA | Eubacteria | Firmicutes | Not Available | Indirect association between microbiota composition and metabolites measured in host biospecimen | Not Available |
| MMDBm0001209 | Vibrio fischeri ES114 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001210 | Vibrio fischeri MJ11 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001212 | Alkalilimnicola ehrlichii MLHE-1 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001257 | Bacillus clausii KSM-K16 | Eubacteria | Firmicutes | Human Feces | Not Available | RHEA |
| MMDBm0001293 | Bordetella petrii DSM 12804 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001294 | Bordetella avium 197N | Eubacteria | Proteobacteria | Turkey | Not Available | RHEA |
| MMDBm0001308 | Bradyrhizobium japonicum USDA 110 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001449 | Chromohalobacter salexigens DSM 3043 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001538 | Desulfococcus oleovorans Hxd3 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001665 | Hahella chejuensis KCTC 2396 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001676 | Halomonas elongata DSM 2581 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001712 | Hyphomonas neptunium ATCC 15444 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001802 | Marinomonas sp. MWYL1 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001886 | Mycobacterium sp. MCS | Eubacteria | Actinobacteria | Not Available | Not Available | RHEA |
| MMDBm0001889 | Mycobacterium sp. KMS | Eubacteria | Actinobacteria | Not Available | Not Available | RHEA |
| MMDBm0001890 | Mycobacterium vanbaalenii PYR-1 | Eubacteria | Actinobacteria | Not Available | Not Available | RHEA |
| MMDBm0001893 | Mycobacterium gilvum PYR-GCK | Eubacteria | Actinobacteria | Not Available | Not Available | RHEA |
| MMDBm0001896 | Mycobacterium abscessus ATCC 19977 | Eubacteria | Actinobacteria | Human | Not Available | RHEA |
| MMDBm0001942 | Nitrosococcus oceani ATCC 19707 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001950 | Nocardia farcinica IFM 10152 | Eubacteria | Actinobacteria | Human | Not Available | RHEA |
| MMDBm0001964 | Bordetella bronchiseptica RB50 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
| MMDBm0001965 | Bordetella parapertussis 12822 | Eubacteria | Proteobacteria | Not Available | Not Available | RHEA |
