| MMDBm0000023 | Arcobacter butzleri RM4018 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0000026 | Bacillus cereus AH187 (F4810/72) | Eubacteria | Firmicutes | Human | Not Available | RHEA |
| MMDBm0000027 | Bacillus cytotoxicus NVH 391-98 | Eubacteria | Firmicutes | Human Feces | Not Available | RHEA |
| MMDBm0000028 | Bacillus halodurans C-125 | Eubacteria | Firmicutes | Human Feces | Not Available | RHEA |
| MMDBm0000046 | Bacteroides fragilis NCTC 9343 | Eubacteria | Bacteroidetes | Human | Not Available | RHEA |
| MMDBm0000047 | Bacteroides fragilis YCH46 | Eubacteria | Bacteroidetes | Human | Not Available | RHEA |
| MMDBm0000055 | Bacteroides thetaiotaomicron VPI-5482 | Eubacteria | Bacteroidetes | Human | Not Available | RHEA |
| MMDBm0000057 | Bacteroides vulgatus ATCC 8482 | Eubacteria | Bacteroidetes | Human | Not Available | RHEA |
| MMDBm0000097 | Brevibacillus brevis NBRC 100599 | Eubacteria | Firmicutes | Human Feces | Not Available | RHEA |
| MMDBm0000100 | Campylobacter fetus subsp. fetus 82-40 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0000101 | Campylobacter hominis ATCC BAA-381 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0000114 | Clostridium acetobutylicum ATCC 824 | Eubacteria | Firmicutes | Human Feces | Not Available | RHEA |
| MMDBm0000162 | Escherichia coli CFT073 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0000167 | Escherichia coli SMS-3-5 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0000169 | Escherichia coli UTI89 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0000171 | Eubacterium eligens ATCC 27750 | Eubacteria | Firmicutes | Human | Not Available | RHEA |
| MMDBm0000173 | Eubacterium rectale ATCC 33656 | Eubacteria | Firmicutes | Human | Not Available | RHEA |
| MMDBm0000198 | Lachnoclostridium phytofermentans ISDg | Eubacteria | Firmicutes | Human Feces | Not Available | RHEA |
| MMDBm0000213 | Leuconostoc citreum KM20 | Eubacteria | Firmicutes | Human Feces | Not Available | RHEA |
| MMDBm0000221 | Ochrobactrum anthropi ATCC 49188 | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0000232 | Parabacteroides distasonis ATCC 8503 | Eubacteria | Bacteroidetes | Human | Not Available | RHEA |
| MMDBm0000281 | Streptococcus thermophilus CNRZ1066 | Eubacteria | Firmicutes | Human Feces | Not Available | RHEA |
| MMDBm0000282 | Streptococcus thermophilus LMD-9 | Eubacteria | Firmicutes | Human Feces | Not Available | RHEA |
| MMDBm0000332 | Pseudomonas fluorescens | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
| MMDBm0000368 | Shigella flexneri | Eubacteria | Proteobacteria | Human | Not Available | RHEA |
