| MMDBm0000010 | Aeromonas jandaei Riv2 | Eubacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000012 | Agrobacterium tumefaciens F2 | Eubacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000095 | Bradyrhizobium elkanii USDA 76 | Eubacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000105 | Citrobacter freundii ATCC 8090 = MTCC 1658 | Eubacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000160 | Escherichia coli | Eubacteria | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0000194 | Klebsiella aerogenes KCTC 2190 | Eubacteria | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0000221 | Ochrobactrum anthropi ATCC 49188 | Eubacteria | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0000222 | Ochrobactrum intermedium LMG 3301 | Eubacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000288 | Vibrio mimicus MB-451 | Eubacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000337 | Ralstonia pickettii | Eubacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0000361 | Zymomonas mobilis | Eubacteria | Proteobacteria | Not Available | Microbial culture | Not Available |
| MMDBm0000362 | Citrobacter koseri | Eubacteria | Proteobacteria | Human | Not Available | VMH |
| MMDBm0000363 | Enterobacter cloacae | Eubacteria | Proteobacteria | Human | Not Available | VMH |
| MMDBm0000364 | Escherichia fergusonii | Eubacteria | Proteobacteria | Goat Feces | Not Available | VMH |
| MMDBm0000371 | Aeromonas salmonicida | Eubacteria | Proteobacteria | Not Available | Microbial culture | Not Available |
| MMDBm0000683 | Stenotrophomonas maltophilia | Eubacteria | Proteobacteria | Human | Not Available | VMH |
| MMDBm0000750 | Actinobacillus succinogenes | Eubacteria | Proteobacteria | Not Available | Microbial culture | Not Available |
| MMDBm0000753 | Enterobacter cancerogenus | Eubacteria | Proteobacteria | Human | Not Available | VMH |
| MMDBm0000890 | Parvularcula bermudensis | Eubacteria | Proteobacteria | Not Available | Microbial culture | Not Available |
| MMDBm0001030 | Agrobacterium tumefaciens | Eubacteria | Proteobacteria | Human | Not Available | VMH |
| MMDBm0001066 | Klebsiella pneumoniae | Eubacteria | Proteobacteria | Human | Microbial culture | Not Available |
| MMDBm0001067 | Klebsiella variicola | Eubacteria | Proteobacteria | Human Feces | Metabolic reconstruction | VMH |
| MMDBm0001198 | Aeromonas hydrophila subsp. hydrophila ATCC 7966 | Eubacteria | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0001199 | Aeromonas veronii B565 | Eubacteria | Proteobacteria | Human | Metabolic reconstruction | VMH |
| MMDBm0001450 | Citrobacter koseri ATCC BAA-895 | Eubacteria | Proteobacteria | Human | Metabolic reconstruction | VMH |
